Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1138 |
Symbol | |
ID | 4021614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1293804 |
End bp | 1294508 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961330 |
Product | ABC transporter related |
Protein accession | YP_568277 |
Protein GI | 91975618 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.113733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGAGG TCGAGGGGCT GGTCGCGGGC TATGGCGGAT CGCCGATCCT GCGCGACGTG TCGATCAGGC TCGCCAGCGG CGATATCGTC GGGCTGCTCG GCGCCAACAA CGCCGGCAAG ACCACGCTGA TCAATTGCCT GTCCGGCCTG GTGTCGCCGA TGGCGGGCAA GATCCTGTTC GAGGGACAGG ACATCACGCG CGCGACCTCG CAGCAGCGGG TCGAGCTCGG CATCATTCAG GTGCCCGAAG GCCGGCTGGT GTTTCCGGAG ATGAGCGTGC GCGAGAACCT GCTGCTCGGT GGGTTCTGCG ATCGCGCCAG GCCGCATCGG CCCGCGCAGA TGACCAAGGT GCTCGAGCTG TTTCCGCGGT TGCAGGAGCG GCTGTCGCAG GCGGCGGGCA CGCTGTCGGG CGGCGAGCAG CAGATGCTGG CGATCGGCCG CGGCCTGATG GCCGAGGCGC GCGTCCTGAT GCTGGACGAG CCGTCGCTCG GGCTCTCGCC GCTGTTCGTC CAGTACATCT TCGAGATCAT CGACCGGCTG CACAGTGACG GCCTGACGAT ACTGCTGGTC GAGCAGAATC TCAATCTGAC GCTGCGGCAC GCGCAGCGTT GCTACGTGCT CGAACGCGGA CAGATCGCCG TCGAAGGCGA CGCCGATGTC GTGCGCGACG ATCCGCGAAC GCGGCAAGCC TATCTGGGTC TGTGA
|
Protein sequence | MLEVEGLVAG YGGSPILRDV SIRLASGDIV GLLGANNAGK TTLINCLSGL VSPMAGKILF EGQDITRATS QQRVELGIIQ VPEGRLVFPE MSVRENLLLG GFCDRARPHR PAQMTKVLEL FPRLQERLSQ AAGTLSGGEQ QMLAIGRGLM AEARVLMLDE PSLGLSPLFV QYIFEIIDRL HSDGLTILLV EQNLNLTLRH AQRCYVLERG QIAVEGDADV VRDDPRTRQA YLGL
|
| |