Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1118 |
Symbol | |
ID | 4021594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1272545 |
End bp | 1273624 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637961310 |
Product | basic membrane lipoprotein |
Protein accession | YP_568257 |
Protein GI | 91975598 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0536373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.804172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAGA CGATTGTAAC GGCTGCGCTG GTGCTGGCGG CGGGCTGCGC CGGACTGTCG GCGGCCTCCG CGGCGGACAA GCTCAAGATC GGCTTCGTCT ATATCGGCCC GATCGGCGAT TTCGGCTGGA CCCATCAGCA CGATCTGGCG CGCCAGGCCG TCGTCAAGGA ATTCGGCGAC AAGATCGAGA CCACCTTCCT CGAAAGCGTC GGCGAAGGCC CCGACGCCGA GCGCTCGATC GAGCAGCTCG CGCGCGCCGG CAACAAGCTG ATCTTCGCCA CCTCGTTCGG CTACATGGAT TCGACCATCA AGGTCGCCAA GAAATATCCC GACGTGAGGT TCGAGCACGC CACCGGCTAC AAGCGCGAGC ACAATGTCGC GACCTATTCG GGCCGGTTCT ACGAGGGCCG CGCGATCCAG GGCGCGATCG CGGCGAAAAT GTCGAAGAAG GGTGTGATCG GCTATATCGG TTCGTTCCCG GTGCCGGAAG TGATCTCCGG CATCAACGCC ACGATGCTGG CGGCGCAGAA AATCAATCCG AACATCAAGG TCAAGATCGT CTGGGTGAAC TCCTGGTTCA ACCCCGGCAA GGAAGCCGAC GCCGCCAAGG CGCTGCTCGA TCAGGGCGCC GACGTGATCA TGCAGCACAC CGACAGCGCC GCGCCGATGC AGGTCGCCAA TGAGCGCGGC GCGTTCGCCT TCGCGCAGGC CACCGACATG ATGAAGTTCG GCGCCAAGGC TCAGCTCACC GGCATCGTCG ATAACTGGAC GCCGTACTAC ACCTCCCGCA TCAAGGCGGT GCTGGAGAAC AACTGGCAGT CGGGCGACAC CTGGGGCGGC CTCAAGGACA AGATGATCCT GATGGCGCCC TATACCAACA TGCCGGAGGC CGTGAAGAAG CTCGCGGTCG AGACCGAGGC CGGCATCGTC GACGGCAGCA TCAAGCCGTT CGCCTGCCCG ATCCTGGATC AGGACGGCAA GGAGATCGAG TGCAAGGGCG GCGACCGCCT CGACGACAGC CAGGTGCTCG GCATGAATTT CTACATCAAG GGCATCGACG ACAAGATTCC CGGCAAGTAG
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Protein sequence | MRKTIVTAAL VLAAGCAGLS AASAADKLKI GFVYIGPIGD FGWTHQHDLA RQAVVKEFGD KIETTFLESV GEGPDAERSI EQLARAGNKL IFATSFGYMD STIKVAKKYP DVRFEHATGY KREHNVATYS GRFYEGRAIQ GAIAAKMSKK GVIGYIGSFP VPEVISGINA TMLAAQKINP NIKVKIVWVN SWFNPGKEAD AAKALLDQGA DVIMQHTDSA APMQVANERG AFAFAQATDM MKFGAKAQLT GIVDNWTPYY TSRIKAVLEN NWQSGDTWGG LKDKMILMAP YTNMPEAVKK LAVETEAGIV DGSIKPFACP ILDQDGKEIE CKGGDRLDDS QVLGMNFYIK GIDDKIPGK
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