| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1103 |
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| Symbol | |
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| ID | 4021579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1252825 |
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| End bp | 1254717 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961295 |
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| Product | long-chain-acyl-CoA synthetase |
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| Protein accession | YP_568242 |
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| Protein GI | 91975583 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAA TCGTCAGTCG CATTCGAGTA AGTTGCACCG ACAATTCTCA CGATCTTGTC
GGGCTGGCGT TCATGAACAT CCAAGCAAGA CCTGCGACGG ACGACGCGCT GCAGACGCGT
CGCGCGCAAC CATCGGTGGC CAAAAGCTGG TTGAAGGCGA TCGAGATCAC GGCGCGGGTC
GAGCAGGAGC CGCGACGACT GCTCGCAACC GTCGTCGACG AATGGGCAGC CGTCGCACCG
AACTCCCCCG CGATCGTGTC GGATCGCGAC TCCTACAGCT ACGCGGAGCT CGCGCGCCGC
ATCAACCGCT ATGCGCGCTG GGCGCTGGAG AACGGGGTCG GCATCGGCGA CGTCGTCTGC
CTGCTGATGT CGAACCGGCC GGACTACGTC GCAGCCTGGC TCGGCATCAC CAAGGTCGGC
GGCGTGGTCG CGCTGATCAA CACCCAGCTC GTCGGCGCAT CCCTGGCGCA TTGCATCGAC
ATCGCGCAGC CCGGACACAT CATCGTCGGC GAGGAATTCG TCGACGCGTG GGAGAGCGCC
CGCGCGCATC TCGGAGCGGC TCCGCGAATC TGGCTCCATG GCGAGACTTC TGGAGACAAG
GCGCTGGACC AGGCGCTCGC GGCGCTCGAC AGCGCTGCGC TGGCGCCGCA GGAGCAGCGC
GACGTCGGCA TCGATGATCT GGCGCTGCTG ATCTACACAT CCGGAACCAC CGGCCTGCCC
AAGGCGGCGC GCGTCACCCA TCGCCGGGTG ATGGGCTGGG CCGGCTGGTT CGCGGGGTTG
ACCGACGCCG CACCGGACGA TCGGATGTAC AACTGCCTGC CGATCTATCA CAGCGTCGGC
GGCGTGGTCG CGACCGGCAG CATGCTGATG GCGGGCGGCT CGGTGGTGAT CGCCGAGAAA
TTCTCCGCGA GCCGGTTCTG GGACGACATC ATCCGCTGGG ACTGCACGCT GTTTCAATAT
ATCGGCGAAC TCTGCCGCTA TCTGCTGCAG GCGCCGCCAT CCGACCGCGA CACCCGGCAT
CGGCTGCGGC TGTGCTGCGG CAATGGATTG CGCGGCGAGA TCTGGGAGCC GTTCCAGGCG
CGCTTTGCGA TCCCCCGCAT CCTCGAATTC TACGCGTCGA CCGAGGGCAA TTTCTCGCTC
TACAATGTCG AGGGCAAGCC CGGCGCGATC GGGCGCATTC CGTCATTTCT GGCGCATCGC
TTTCCCGCGG CGATCGTCAA ATTCGACGTC GAGACCGGCG GTCCGCTGCG CGACGAGAAC
GGGCTGTGCA TCCGTTGCGC CCGCGGCGAA ACCGGAGAAG CGATCGGCCG GATCGGCGAG
GCGCGCGACA GCGGCGGCCG GTTCGAAGGC TACACCAACG ATTCCGAAAC CGAGAAGAAG
GTGCTGCGCG ACGTGTTCGC CGCAGGCGAC GCGTGGTTTC GCACCGGCGA CCTGATGAGG
CTCGACGACA AGGGCTTCTT CCATTTCGTC GACCGGATCG GCGACACCTT CCGCTGGAAG
GGCGAGAACG TCGCGGCGAG CGAGGTCGCC GAAACGATCG CCGCCTGCCC CGGCGTGATC
GACGCCAGCG TCTATGGCGT GTCGGTGCCC CACACGGACG GCCGCGCCGG CATGGCGGCG
CTGGTCGTCG ACGATCGCTT CGACCTCGCG GCGCTGCATC GCCATCTCGC CGAACGGTTG
CCGGCCTATG CGCGCCCGGT CTTCATCCGG ATCCAGGCCG CACTGCAGAT CACCGGCACC
TTCAAGCAGA ACAAGCAGGA TTTGATCCGC GACGGCTTCG ATCCCGTCGT TGTGAGCGAT
CCGCTGTATC TCGGCGATGC GACCGCAGCC GGCTACGTCG TGCTCGATGA GCCTCTGCAT
CGCAGGATTG CGGCCGGCAC ACTGCGGCTT TGA
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| Protein sequence | MQSIVSRIRV SCTDNSHDLV GLAFMNIQAR PATDDALQTR RAQPSVAKSW LKAIEITARV
EQEPRRLLAT VVDEWAAVAP NSPAIVSDRD SYSYAELARR INRYARWALE NGVGIGDVVC
LLMSNRPDYV AAWLGITKVG GVVALINTQL VGASLAHCID IAQPGHIIVG EEFVDAWESA
RAHLGAAPRI WLHGETSGDK ALDQALAALD SAALAPQEQR DVGIDDLALL IYTSGTTGLP
KAARVTHRRV MGWAGWFAGL TDAAPDDRMY NCLPIYHSVG GVVATGSMLM AGGSVVIAEK
FSASRFWDDI IRWDCTLFQY IGELCRYLLQ APPSDRDTRH RLRLCCGNGL RGEIWEPFQA
RFAIPRILEF YASTEGNFSL YNVEGKPGAI GRIPSFLAHR FPAAIVKFDV ETGGPLRDEN
GLCIRCARGE TGEAIGRIGE ARDSGGRFEG YTNDSETEKK VLRDVFAAGD AWFRTGDLMR
LDDKGFFHFV DRIGDTFRWK GENVAASEVA ETIAACPGVI DASVYGVSVP HTDGRAGMAA
LVVDDRFDLA ALHRHLAERL PAYARPVFIR IQAALQITGT FKQNKQDLIR DGFDPVVVSD
PLYLGDATAA GYVVLDEPLH RRIAAGTLRL
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