| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0994 |
|---|
| Symbol | |
|---|
| ID | 4021469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1120290 |
|---|
| End bp | 1122260 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 656 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637961185 |
|---|
| Product | chemotaxis sensory transducer |
|---|
| Protein accession | YP_568133 |
|---|
| Protein GI | 91975474 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.357708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTCC GCCTCCGCCT CAGCCACAAG ATCAACTCCA TCGCCGTCGT CGGCATCGCC
GGCGTTCTCG CCCTGGGCGC GCTATTCACG TTCGGCAACG CGTCACAGGA CGCAGCGCGG
ATCGAGGACG AACGTGCAAG GGCGCTCGGT GACAGCAACG CGAAGCTTCA GATCGCGATG
CTGGAGCAGC GCCGCGCTGA AAAGAATTTC ATCATCCGCA AGGAAGAGAG CTACCTCCGC
CAGTACCAGG ACAACGCCAA GGCGGCGAAG GCAATTCTCG CCGACATGAC CCAGCGCGCC
GAAGCAGCCG GGCAGACGGA CCTGAGCGGC AAGATGAAGA CCATCCAGGC GGGCTACGAA
GACTATGACC GCCATTTTGC GCAACTCGCC GACGCCCAGA TCAAGCTCGG CCTGAAAGAA
GATCTCGGGC TGGAGGGCAA CATACGCACT TTGGCGAAAA CAATCGAGAC CGCGCTCAGC
ACACTCGACG AACAGAAGCT GATGGTGACG ATGTTGATGA TACGGCGGCA CGAGAAGGAC
TTCATGCTGC GCGGCAATCC GCAGTACCTC GACGACATGA AGAAGCGCAT CGAGGAATTC
TCCGCGCAAC TCGCCGCCGC CGATCTTCCC ACCGCTTCGA AGACCGACAT CGGCCGGCAG
CTCGCCGTCT ATCAACGCGA CTTCAAGGGA TGGATGGAAA CCGGGCAGGT CATGGTCCAG
GAGGAAAAAA ACCTCGTGTC CCGCTTCCGC GCGATCGAGC CGGTGCTCCA AAGCGTCGGA
GCGACTATCA ATCAGTCCGC GGAACAGGCG AAGGCTGCAG CCGCCGCGGC GCGCGAGACG
ACGACGTCGC GGATGCAGAT CGCGATCGCG CTGATCATCC TCAGCGTCAG CCTGCTCGGC
CTGTTGATCG GCCGTTCGGT GGCGCGCCCG CTGAAAGGCT TGACTTCCGG GCTCAGAGAA
CTCGGCGCCG GCAATTTCGA CGTGGTACTG CCCGGCCTCG ACCGTCACGA CGAGATCGGC
GACATGGCGC AGGCGGTGGA ATCCTTCAAA GTGATGGCGC AGGACAGGGC CCGTGCCGAG
GCCGAGGCCA AGGCTCAGCA GGAACACCTC GCCGCCGAAC AGCGCAAGCG CGACATGAAC
AAGCTGGCGG ATCAGTTCGA GGAGGCGGTC GGGGAGATCG TCGAGACCGT CTCGTCCGCC
TCGACTGAAC TCGAAGCATC GGCGACGACG CTGACCGACA CAGCGCAGCA CGCGCAGCAG
TTCACCACGC TCGTCGCAGC AGCGTCGGAG GAAGCCTCGA CCAATGTGGA GTCGGTGGCG
TCCGCCAGCG AGGAGATGGC ATCGTCGGTC ACCGAGATCA GCCGCCAGGT GCAGGAGTCC
GCGCGGATCG CCAGCGAAGC GGTGACGCAG GCGCAGGAGA CCAACGATCG CGTCAGCCAC
CTGTCGGAGG CTGCCTCGCG GATCGGCGAC GTCGTTGATT TGATCAACAC CATCGCCTCC
CAGACCAACC TTCTGGCGCT GAATGCGACC ATCGAGGCTG CGCGCGCCGG CGACGCCGGG
CGCGGCTTCG CTGTGGTGGC GAGCGAGGTC AAGGCGCTGG CTGAGCAGAC CGCGAAGGCG
ACCGAACAGA TCAGCCAGCA GGTCGGCGGC ATCCAGTCCG CGACCGGCCA GTCGGTGGCG
TCGATCCGCG AGATCAGCGG CACGATTGCG CGGATGTCGG AGATCGCCGC GACGATCGCC
TCCGCGGTCG AGGAGCAGGG CGCCGCGACC AAGGAAATCT CACGCAACGT TCACCACGCA
GCCGCCGGCA CCCATGAGGT TTCGGTCAAC ATCGTCGAAG TGCAGCGCGG CGCGAGCGAG
ACCGGTTCGG CGTCTGCGCA GGTGCTGACG GCGGCGCATT CGCTGGCCCA CGACAGCGCA
CGCCTGAAGG ACGAAGTCAG CCGCTTCCTG CGCACGGTGC GCGCCAGTTG A
|
|---|
| Protein sequence | MPFRLRLSHK INSIAVVGIA GVLALGALFT FGNASQDAAR IEDERARALG DSNAKLQIAM
LEQRRAEKNF IIRKEESYLR QYQDNAKAAK AILADMTQRA EAAGQTDLSG KMKTIQAGYE
DYDRHFAQLA DAQIKLGLKE DLGLEGNIRT LAKTIETALS TLDEQKLMVT MLMIRRHEKD
FMLRGNPQYL DDMKKRIEEF SAQLAAADLP TASKTDIGRQ LAVYQRDFKG WMETGQVMVQ
EEKNLVSRFR AIEPVLQSVG ATINQSAEQA KAAAAAARET TTSRMQIAIA LIILSVSLLG
LLIGRSVARP LKGLTSGLRE LGAGNFDVVL PGLDRHDEIG DMAQAVESFK VMAQDRARAE
AEAKAQQEHL AAEQRKRDMN KLADQFEEAV GEIVETVSSA STELEASATT LTDTAQHAQQ
FTTLVAAASE EASTNVESVA SASEEMASSV TEISRQVQES ARIASEAVTQ AQETNDRVSH
LSEAASRIGD VVDLINTIAS QTNLLALNAT IEAARAGDAG RGFAVVASEV KALAEQTAKA
TEQISQQVGG IQSATGQSVA SIREISGTIA RMSEIAATIA SAVEEQGAAT KEISRNVHHA
AAGTHEVSVN IVEVQRGASE TGSASAQVLT AAHSLAHDSA RLKDEVSRFL RTVRAS
|
|---|
| |