Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0975 |
Symbol | |
ID | 4021450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1105259 |
End bp | 1106032 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637961166 |
Product | hypothetical protein |
Protein accession | YP_568114 |
Protein GI | 91975455 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.123603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCGA TCTACCGAAT CGACGGCAAT GCAATCGAGA CCAGCGGCCA CGCCGCCGGG CCATGGGATC CGTCGATGCA ACACGGCTCG CCGCCATCGG CGCTGGTGGC GCATATCGCC GAACAGATGC CGGCGCCGGC GCCGATGCAT GTGGTGCGGG TGACGGTCGA CCTGCTGCGG CCGGTGCCGG TCGGGCCGCT GACCTTCGAC ACCGAGGTGC TGCGCGAGGG CCGCAAGATT CAGCTCTGCG CCGTCCGGCT GTTGTCGAAC GGCGTGGTGG TGGTGAATGC CACGGTGCTC AAGGTCCGCA ACGCGCCGCC GGATCTGCCG GATCATATCG AGCACCCTGC CCTCGACGTG CCGCTGCCCG ACGACTGCCC GCCGCTCGAT GTCAGTTTCA TCGGCAATCC GTTCGTCGGC GGCATGTCGC TGCGCAAGGT CCATGGCGGC TTCGGCTCGA TCGGCCCGGG CGCGACCTGG TATCGCGCCG ACCGGCCGCT GATCGAGGGC CAGCCGACCT CGCAACTGAT GCGCGCGGTG ATCGCCTCCG ACTTCAGCAA CGCGACCTCC GCGGTACTCG ATTTCCGGCA CTGGATCTTC ATCAATGCCG ATCTCAACGT GTTCCTGGCG CGCCAGCCGG TCGGCGACTG GATTCTGCTG AACTCGGAAA TGTGGCTCGG CCCGGACGGC GCCGGCACCG CCTCGTCGCG GCTCGCCGAC GTCCAGGGTT ACTTCGGCCG CGCCATCCAG AACCTGGTGA TCGAACAGCG CTGA
|
Protein sequence | MDAIYRIDGN AIETSGHAAG PWDPSMQHGS PPSALVAHIA EQMPAPAPMH VVRVTVDLLR PVPVGPLTFD TEVLREGRKI QLCAVRLLSN GVVVVNATVL KVRNAPPDLP DHIEHPALDV PLPDDCPPLD VSFIGNPFVG GMSLRKVHGG FGSIGPGATW YRADRPLIEG QPTSQLMRAV IASDFSNATS AVLDFRHWIF INADLNVFLA RQPVGDWILL NSEMWLGPDG AGTASSRLAD VQGYFGRAIQ NLVIEQR
|
| |