Gene RPD_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0975 
Symbol 
ID4021450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1105259 
End bp1106032 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID637961166 
Producthypothetical protein 
Protein accessionYP_568114 
Protein GI91975455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.123603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA TCTACCGAAT CGACGGCAAT GCAATCGAGA CCAGCGGCCA CGCCGCCGGG 
CCATGGGATC CGTCGATGCA ACACGGCTCG CCGCCATCGG CGCTGGTGGC GCATATCGCC
GAACAGATGC CGGCGCCGGC GCCGATGCAT GTGGTGCGGG TGACGGTCGA CCTGCTGCGG
CCGGTGCCGG TCGGGCCGCT GACCTTCGAC ACCGAGGTGC TGCGCGAGGG CCGCAAGATT
CAGCTCTGCG CCGTCCGGCT GTTGTCGAAC GGCGTGGTGG TGGTGAATGC CACGGTGCTC
AAGGTCCGCA ACGCGCCGCC GGATCTGCCG GATCATATCG AGCACCCTGC CCTCGACGTG
CCGCTGCCCG ACGACTGCCC GCCGCTCGAT GTCAGTTTCA TCGGCAATCC GTTCGTCGGC
GGCATGTCGC TGCGCAAGGT CCATGGCGGC TTCGGCTCGA TCGGCCCGGG CGCGACCTGG
TATCGCGCCG ACCGGCCGCT GATCGAGGGC CAGCCGACCT CGCAACTGAT GCGCGCGGTG
ATCGCCTCCG ACTTCAGCAA CGCGACCTCC GCGGTACTCG ATTTCCGGCA CTGGATCTTC
ATCAATGCCG ATCTCAACGT GTTCCTGGCG CGCCAGCCGG TCGGCGACTG GATTCTGCTG
AACTCGGAAA TGTGGCTCGG CCCGGACGGC GCCGGCACCG CCTCGTCGCG GCTCGCCGAC
GTCCAGGGTT ACTTCGGCCG CGCCATCCAG AACCTGGTGA TCGAACAGCG CTGA
 
Protein sequence
MDAIYRIDGN AIETSGHAAG PWDPSMQHGS PPSALVAHIA EQMPAPAPMH VVRVTVDLLR 
PVPVGPLTFD TEVLREGRKI QLCAVRLLSN GVVVVNATVL KVRNAPPDLP DHIEHPALDV
PLPDDCPPLD VSFIGNPFVG GMSLRKVHGG FGSIGPGATW YRADRPLIEG QPTSQLMRAV
IASDFSNATS AVLDFRHWIF INADLNVFLA RQPVGDWILL NSEMWLGPDG AGTASSRLAD
VQGYFGRAIQ NLVIEQR