Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0922 |
Symbol | |
ID | 4021397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1040486 |
End bp | 1041697 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637961113 |
Product | putative transmembrane protein |
Protein accession | YP_568061 |
Protein GI | 91975402 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.546528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCGGCA CGGAGCGGGA GCGTCGCAAA GGCGTTGGGC CGTCACGCTC GCCAGCCGGA ATTCGGACGT TTGCCGTTGC TTCGATTGTC GGCGCGATCA GCTTCATCGT CGGCGGCGTC ATGCTGTTTG CCATTGCGAC CGCGGGTGTC GTGCTTCTGG TGACGGCCGC CTATTGGCGT GTGCACGAGG ACGATCCTGG ACTGACAACG GAATTCGCCT TGATTGCGAC CGTCCTGCTT GGCGGGCTGT CGATGCAGAA GCCGGAACTT GCCGGCGGCA TTGCGGTCGT CATGGCGATC TTGCTGACAG CAAAATCATG GCTGCATCGG TTCGTCCGGA CCTGGCTCAC CGAAGACGAG CTCGAGGATG CCCTGGTTTT TGCCGCAGCT TCGCTTGTTG TCCTGCCGCT TGTGCCGGAC CGTGCGATGG GGCCTTACGG TGCGCTCAAC CCGCACGCCA TCTGGGTCAT CGTCGTCCTC GTCATGGCGA TCAGCGCTGC CGGCTATCTC GCAGTCCGCC TGCTCGGGTC GCGTTTCGGA TTGCCGATAG CAGGCCTGGC ATCCGGCTTC ATTTCGAGCA CGGCGACGAT CGGCGCCATG GGAGCGCGGG CCGCCAAGTC CAGAGAGGCT CTCCCGGCCG CTGTTGCAGG GGCGGTGTTG TCGACAATCG CGACGATTGT TCAGATGACG TTGGTTCTGG CCGCGACCAG CATGACCACG CTGCAATCAC TGGCCGCCCC GTTGCTCTGC GCAGGCCTCG CCGCCATCGG CTACGGCAGC GCATTCACGA TCCTCGCCTT GCGGCAACAG GTGGACGAAG TCCCCCAACA AGGCCGCGCC TTCAGCATCT CGACCGCGCT GGTGTTCGCC TCCATCCTGG CTTGCATCCT GGTCGCCTCC GCAGCGCTTC AGGATATGTT CGGCGAACAA GGCACCTTCG TCGCAGCAGC TCTCGCCGGC TTCGTGGATA CGCATTCCGC GGCGATTTCG ATCGCCACAT TGGTGTCGTC GGGGAAAATC ACGCCGGATG ATGCGATCCT TCCGATTTTG GCGGGGCTTT CGACCAACAC GATCAGCAAG ATGATCTTTG CCGCGATCAG CGGCGGATCG GCATTCGCCA TTCGAGTGAT CCCGGGACTG ATCGTCGTCG CACTGGCGGC ATGGGCAGGC ACCCACCTCA GCGTCAGCCT GTTGGAGTTT TTCCGGTTCT GA
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Protein sequence | MIGTERERRK GVGPSRSPAG IRTFAVASIV GAISFIVGGV MLFAIATAGV VLLVTAAYWR VHEDDPGLTT EFALIATVLL GGLSMQKPEL AGGIAVVMAI LLTAKSWLHR FVRTWLTEDE LEDALVFAAA SLVVLPLVPD RAMGPYGALN PHAIWVIVVL VMAISAAGYL AVRLLGSRFG LPIAGLASGF ISSTATIGAM GARAAKSREA LPAAVAGAVL STIATIVQMT LVLAATSMTT LQSLAAPLLC AGLAAIGYGS AFTILALRQQ VDEVPQQGRA FSISTALVFA SILACILVAS AALQDMFGEQ GTFVAAALAG FVDTHSAAIS IATLVSSGKI TPDDAILPIL AGLSTNTISK MIFAAISGGS AFAIRVIPGL IVVALAAWAG THLSVSLLEF FRF
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