Gene RPD_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0920 
Symbol 
ID4021395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1038627 
End bp1038980 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content62% 
IMG OID637961111 
ProductPRC-barrel 
Protein accessionYP_568059 
Protein GI91975400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.114023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG CAACAAGCGA GACCGTCAGC CTGATCGGCA GCGACAAGGT TCAGGGAACC 
GCGGTGTACG GCGCCGACGG CGAGAAGATC GGCAACATCG AGCGCGTCAT GATCGAAAAG
GTCAGCGGCA AAGTGTCCTA TGCGGTGCTC AGCTTCGGCG GCTTTCTCGG GATCGGCGAC
GATCACTATC CGCTGCCCTG GCCGTCGCTG AAATACAATG TCGACCTCGG CGGTTACCAG
ACGATGGTCA CCACCGACCA GCTCGAGCGC GCGCCGAAAT ATGGCCGCGA CGATGAATAT
GACTGGCGGG GCGCCCGCAA GGTCGACGAT TATTACGGCG TCGCGCTGAG CTGA
 
Protein sequence
MTPATSETVS LIGSDKVQGT AVYGADGEKI GNIERVMIEK VSGKVSYAVL SFGGFLGIGD 
DHYPLPWPSL KYNVDLGGYQ TMVTTDQLER APKYGRDDEY DWRGARKVDD YYGVALS