| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0904 |
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| Symbol | |
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| ID | 4021378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1017635 |
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| End bp | 1018801 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961094 |
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| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
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| Protein accession | YP_568043 |
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| Protein GI | 91975384 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGT GTATTTTTTC CGCGTCTGGC GGCCCTGCGG CCGCTGTGAG GATCGCCGCC
GTGCCGTTTG CGTTGCCGCC CGATGCCGAT GGAATTCTGC CCGACCGCAT GATTGCGGCG
ATGGCCGAGG CCGGGCTGAT CCTGCCGGAA TACCCGTTCG TCGAAAGCCA GATCCAGCCG
GCCAGCCTGG ATTTGCGGCT CGGCGCGGTC GCCTACCGGG TGCGCGCGAG CTTCCTGCCG
GGGCCGGACT GCACCGTCGC CGAGCGGATC GACGAGCTGA AGCTGCACGA GATCGATCTG
TCCGACGGCG CGGTGCTGGA GACCAACTGC GTCTACATCG TGCCGCTGCT GGAAAGCCTG
GCGCTGCCGC GCAGCATCGT CGCCGCCGCC AATCCGAAAA GCTCGACCGG GCGACTTGAT
GTCTTCACCC GCGTGATCGC CGACGGCACC CGCCGCTTCG ACATGATCGG CGCCGGCTAT
CACGGCCCGC TTTATGCGGA GATCAGCCCG AAGACCTTCC CGGTGCTGCT GCGCGAGGGC
TCGCGGCTGT CGCAGGTCCG CTTCCGCACC GGCCACGCCA CGCTCGACGC CGACGAGTTG
GATGCGCTGC ACGACCTCGA ACGGCTGGTC GATGCCGACG ACGCCGATCT CAATGGCGGC
GTCGCGCTCA GCGTCGATCT GTCGGGCGAA AACTCGAACG GCTTTGTCGG CTACCGCGCC
AAGCGTCACA CCGGCGTGGT CGATGTCGAC CGCCGCGGCG GCTATGCGGT CGGCGAGTTC
TGGGAGCCGA TCGCGGCGCG GCCGGACGGC ACGCTGATCC TCGATCCCGG CGAGTTCTAC
ATCCTCGCCT CGAAGGAAGC CGTCCAGGTG CCGCCGGACT ACGCCGCCGA GATGGTGCCG
TTCGACCCGC TGGTCGGCGA ATTCCGCGTG CACTATGCGG GCTTCTTCGA TCCCGGCTTC
GGCTATGAGG GCGCCGGCGG GCTCGGCTCG CGCGCGGTGC TGGAAGTGCG CTCGCGCGAG
GTGCCGTTCA TTCTCGAACA CGGCCAGATC GTCGGCCGCC TGATCTACGA AAAAATGCTG
TCCCGCCCCG CCTCGCTCTA CGGCCAGCGC ATCGGCTCGA ACTATCAGGG CCAGAGCCTG
AAGCTGAGCA AGCATTTCAA GGCGTAG
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| Protein sequence | MKSCIFSASG GPAAAVRIAA VPFALPPDAD GILPDRMIAA MAEAGLILPE YPFVESQIQP
ASLDLRLGAV AYRVRASFLP GPDCTVAERI DELKLHEIDL SDGAVLETNC VYIVPLLESL
ALPRSIVAAA NPKSSTGRLD VFTRVIADGT RRFDMIGAGY HGPLYAEISP KTFPVLLREG
SRLSQVRFRT GHATLDADEL DALHDLERLV DADDADLNGG VALSVDLSGE NSNGFVGYRA
KRHTGVVDVD RRGGYAVGEF WEPIAARPDG TLILDPGEFY ILASKEAVQV PPDYAAEMVP
FDPLVGEFRV HYAGFFDPGF GYEGAGGLGS RAVLEVRSRE VPFILEHGQI VGRLIYEKML
SRPASLYGQR IGSNYQGQSL KLSKHFKA
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