| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0864 |
|---|
| Symbol | |
|---|
| ID | 4021338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 968408 |
|---|
| End bp | 969418 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637961054 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_568003 |
|---|
| Protein GI | 91975344 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.692675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTT CCAAACCCAA CATCACGAAA TCAGCGATGA CCGATTCCGC CGCCGCGATC
CCCTCGGCCC TGCGCACGCT GGAGGCGGAA GCGGACGGCG TCACCGCGCT CGCCGCGGCG
CTGCAATCGG ATTTAGGCGG CGCTTTCGTC GCCGCGATCG AGATGATCCG CAATGCCAAG
GGGCGGCTGA TCATCACCGG GCTGGGCAAA TCCGGGCATA TCGGCCGCAA GATCGCGGCG
ACCTTCGCCT CGACCGGCAC GCCGGCGTTC TTCGTCCATG CCTCGGAAGC CAGCCATGGC
GACCTCGGCA TGATCACCGC CGACGACATT ATCCTCGCAA TGTCGTGGTC CGGCGAGCAG
CCGGAAATGA AGAACCTCAT TACCTACGCC TCGCGGTTCA AGATCGCGCT GATCGCGATG
ACCTCCGACA ACGGCTCGAC GCTGGCCAAG GCGGCCGACA TTTCGCTGAC GCTGCCGAAG
GCGCGCGAGG CCTGCCCGCA CAATCTGGCG CCGACGACGT CGTCATTGAT GATGCTGGCG
CTCGGCGACG CGATCGCGAT CGCGCTGCTG GAGAGCCGCG GCTTCACCTC GACTGATTTC
AGCGTGCTGC ATCCCGGCGG CAAGCTCGGC GCCATGCTGA AATACGCCCG CGACCTGATG
CATACCGGCG AGGCGATCCC GCTGAAGCCG CTCGGCACCA AGATGTCGGA CGCGCTCGTC
GAGATGTCGG CCAAGGGCTT CGGCTGCGTC GGTATCGTCG ACGCCAACGG CCAGATCGCC
GGCATCGTCA CCGACGGCGA TCTGCGGCGG CACATGCGGC CGGACCTGAT GACCGCGATC
GTCGACGAGG TGATGACCAA GCGGCCCAAG ACGATCAGCC CCGGCCTGCT CGCCGGCGAG
ACGCTGGAAT TGCTGAATTC CTCGAAGATC ACCGCGCTGC TGGTGACCGA GGGCAAGAAG
CCGGTCGGCA TCGTGCATCT GCACGATCTG CTCCGCGCCG GCGTGGCGTA A
|
|---|
| Protein sequence | MALSKPNITK SAMTDSAAAI PSALRTLEAE ADGVTALAAA LQSDLGGAFV AAIEMIRNAK
GRLIITGLGK SGHIGRKIAA TFASTGTPAF FVHASEASHG DLGMITADDI ILAMSWSGEQ
PEMKNLITYA SRFKIALIAM TSDNGSTLAK AADISLTLPK AREACPHNLA PTTSSLMMLA
LGDAIAIALL ESRGFTSTDF SVLHPGGKLG AMLKYARDLM HTGEAIPLKP LGTKMSDALV
EMSAKGFGCV GIVDANGQIA GIVTDGDLRR HMRPDLMTAI VDEVMTKRPK TISPGLLAGE
TLELLNSSKI TALLVTEGKK PVGIVHLHDL LRAGVA
|
|---|
| |