| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0820 |
|---|
| Symbol | |
|---|
| ID | 4021294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 924114 |
|---|
| End bp | 924506 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637961010 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_567959 |
|---|
| Protein GI | 91975300 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5349] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.478279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGC ATGCGCCAGA AGTCACCCTG CTGCAGAGTG CGCTGCGCGG CGTCGCCTGC
CGCTGCCCGC GTTGCGGCGA GGGCAAGCTG TATGCGGGTT TCCTGACGCT GCGGCCGCGC
TGCGAGGTCT GCGATCTCGA CTACGCGTTC ATCGATGTCG GCGACGGCGC GGCGGTGTTC
ATGATCCTGA TCGGCGGCGC GATCGTGGTC GGCTGCGCGC TGGTGGTGGA GGTGAAGTAT
CAGCCGCCGT TCTGGCTGCA CGCGGCGCTG TGGGGGCCGC TGGTGCTCGC CACCACGCTG
CTGCCGTTGC GGTCGATGAA GGCGCTGCTG ATCGCGCTGC AATTCCATCA CAAGGCGCAA
GAAGGCCGAC TGGAGGGGCG GGAACCGAAA TGA
|
|---|
| Protein sequence | MSEHAPEVTL LQSALRGVAC RCPRCGEGKL YAGFLTLRPR CEVCDLDYAF IDVGDGAAVF
MILIGGAIVV GCALVVEVKY QPPFWLHAAL WGPLVLATTL LPLRSMKALL IALQFHHKAQ
EGRLEGREPK
|
|---|
| |