| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0809 |
|---|
| Symbol | |
|---|
| ID | 4021283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 913300 |
|---|
| End bp | 913869 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637960999 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_567948 |
|---|
| Protein GI | 91975289 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.22485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.428179 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTGC ATGGAAGAGT CAATATTGAT GCAGCTGCAT ACAGTGCGCT ACATTCGCGG
CGCACGATGG ATGGGGCGAT GAAACGCAAG CCGTCGACCG AAGCGACCGC CGCCTGGGTC
CGTCTGATGC GGGTCCGCAG CCGTGTGCTG GATGCTGTCG AGCTGGATCT GAAAAAGGCC
GGCTTCCCGC CGCTCGCCTG GTACGACGCG CTGCTCGAAT TGTCGCGCGC GCCGGGTGGC
GAGATGCGTC CGGTCGAGCT CGAAAAACAG ATGCTGATTC CGCAGTATTC CACATCGCGC
CTGATCGATC GGCTGGTCGA CGAGGGGCTG GCGGCGCGGC GGGAATGCGA GATGGACAAA
CGCGGCCTGT TCGTGGAAAT CACCGAGGCT GGACGCGAGT TGCAGAAAAC AATGTGGGCC
GCCTATTCTG CGGCGATCGA AAAACACGTC GGCTCGAAAT TGTCCGACGC CGACGCGCTG
CGGTTATGCG GGCTGCTCGA CCGGCTTGGC TGTTCCTGCG ACGGCACGGC GGCCGCGCCG
CCCCCCCGAG ACACCGCGGC TGCGCGATGA
|
|---|
| Protein sequence | MRLHGRVNID AAAYSALHSR RTMDGAMKRK PSTEATAAWV RLMRVRSRVL DAVELDLKKA
GFPPLAWYDA LLELSRAPGG EMRPVELEKQ MLIPQYSTSR LIDRLVDEGL AARRECEMDK
RGLFVEITEA GRELQKTMWA AYSAAIEKHV GSKLSDADAL RLCGLLDRLG CSCDGTAAAP
PPRDTAAAR
|
|---|
| |