Gene RPD_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0800 
Symbol 
ID4021274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp899907 
End bp900830 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID637960990 
Producthypothetical protein 
Protein accessionYP_567939 
Protein GI91975280 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.979856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.617739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCTTT ATCTTCCGAT CGCAGACCTT CCGGTCAACG TCCTGCTGAT CCTGGCGATG 
GGCGCTGCGG TCGGGTTCGT GTCCGGCATG TTCGGGATCG GCGGCGGCTT CCTGATGACG
CCGCTGCTGA TCTTCATCGG GATCTCGCCC GCCGTGGCGG TCGCCTCGGT CACCAGCCAC
ATGGCCGCCT CATCGTTCTC CGGGGCGTTG TCGTACTGGC GACGCCGCGC GATCGATCCG
ATGCTGGCTT TTGTGCTGCT CTGCGGCGGC ATCGCCGGCA CCGCTGTGGG CGTCTGGTTC
TTCGTGCTGA TGCGCTCGGT CGGCCAGCTC GATCTGATGA TCGCGCTGTC CTATGTCGTG
TTGCTGACGG CGGTCGGCGG GCTGATGGTT TATGAAGGGT TGCGCGCGAT CCTGCGCACG
CGCCGCGGCG AGGTCGCGCT GAGCGGCCGC ACCGGCAACC GCAACTGGAT TCACGCGCTG
CCGCTCAAGG TCCGGTTCAA GCGCTCCAAG ATGTATCTGT CGGTGATCCC GGTTGCGGCA
ATCGGCCTGC TGATCGGCTT CATCGGCGCG GTGATGGGGG TCGGCGGCGG CTTCATCCTG
GTGCCGATGC TGATCTATCT GCTCCGGGTG CCGACCAGCA TGGTGGTCGG CACATCGATG
GTGCTGACGC TGGTGACGAT GCTGGTCGCC ACCGTGCTGC ACGCTGCCAC CAACCACCTT
GTCGACGCGG TGCTGGCGCT GATCCTGATG GTCGGCGGCG TCACCGGCGC GCAATTCGGC
GCCCGCGCCG GCCAGCGGAT CCGCGGCGAG CAGCTCCGGC TGCTGCTGGG CCTGCTGGTG
CTCGCGGTGG GCATCCGCTT CGCTATCGAG CTCGGCATCC GCCCCGCCGA GTTGTTTACG
ATCCGTGAAA CCGGGCCGAG CTGA
 
Protein sequence
MQLYLPIADL PVNVLLILAM GAAVGFVSGM FGIGGGFLMT PLLIFIGISP AVAVASVTSH 
MAASSFSGAL SYWRRRAIDP MLAFVLLCGG IAGTAVGVWF FVLMRSVGQL DLMIALSYVV
LLTAVGGLMV YEGLRAILRT RRGEVALSGR TGNRNWIHAL PLKVRFKRSK MYLSVIPVAA
IGLLIGFIGA VMGVGGGFIL VPMLIYLLRV PTSMVVGTSM VLTLVTMLVA TVLHAATNHL
VDAVLALILM VGGVTGAQFG ARAGQRIRGE QLRLLLGLLV LAVGIRFAIE LGIRPAELFT
IRETGPS