| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0794 |
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| Symbol | |
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| ID | 4021268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 891355 |
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| End bp | 892404 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637960984 |
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| Product | putative mRNA 3-end processing factor |
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| Protein accession | YP_567933 |
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| Protein GI | 91975274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.682803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGACCA TGCGTCCGCA CGACATCCTG ATCCCCACGA CCGAAGGCCT GTGCTGCAAA
CCGGGCGGCT TTCACATCGA TCCGGTGCGG CCGGTCGACC GCGCGGTGAT CACCCACGGC
CACTCCGACC ACGCGAGGGC CGGCCACGGC GCGGTGCTGG CGACCCAGGA AACGCTCGAC
ATGATGCGGC TGCGCTACGG CGACGATTTC GCCGGCTCGA CGCAGGCGAT CAGCTATGGT
GAGGAGATTC GGCTCGGCGG CGCGCGCGTG AAATTCCATC CGGCCGGGCA TGTGCTCGGC
TCGGCGCAGG TCGCGGTCGA ATGCGGCGGC ATCCGGATCG TCGCGTCCGG CGACTACAAG
GACGCGCCCG ACCCGACCTG CACGCCGTTC GAGATCGTCG CGTGCGACGT GTTCATCACC
GAGGCCACCT TCGGGCTCCC GGTGTTTCGC CACCCCGACG CGGCGGATGA GGTGAACAAG
CTGCTGGCGT CGGTGGCGCT GTTTCCCGAA CGTGCGCATC TGGTCGGCGC CTATTCGCTC
GGCAAGGCGC AGCGCCTGAT CGCGCTGATC CGCGCCGCCG GCTATGACGC GCCGATCTAT
CTGCACGGCG CGATGGAGAA GATCACGCAG TATTATGCCG AGCGCGGCGT GCCGCTCGGC
GAGCTGCGCC CGGTGAAGGG CGCAAAGAAG GCCGAACTCG CCGGCGCCAT CACGCTGGCG
CCGCCGTCGG CGACCTCCGA TCTGTGGACG CGGCGCTTCC CCGATCCATT GACCGCCTTC
GCCTCCGGCT GGATGCGGGT GCGCGCCCGC GCCAGGCAGC GCGGCGTCGA GCTGCCGCTG
GTGATTTCCG ATCACGCCGA CTGGGACGGC CTGACCGCGA CGATTGCCGC CACCGGCGCA
GGCGAAATCT GGGTCACCCA CGGACAGGAA GACGCGCTGG TGCATTGGTG CAAGTCGCGG
GGCCTGGCGG CGCGGCCACT CGATCTGGTC GGCTATGGCG ACGAGGACGA GGACGTCGGG
ATGCCGGCAA GCGAGGCCGC CGAGGCATGA
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| Protein sequence | MVTMRPHDIL IPTTEGLCCK PGGFHIDPVR PVDRAVITHG HSDHARAGHG AVLATQETLD
MMRLRYGDDF AGSTQAISYG EEIRLGGARV KFHPAGHVLG SAQVAVECGG IRIVASGDYK
DAPDPTCTPF EIVACDVFIT EATFGLPVFR HPDAADEVNK LLASVALFPE RAHLVGAYSL
GKAQRLIALI RAAGYDAPIY LHGAMEKITQ YYAERGVPLG ELRPVKGAKK AELAGAITLA
PPSATSDLWT RRFPDPLTAF ASGWMRVRAR ARQRGVELPL VISDHADWDG LTATIAATGA
GEIWVTHGQE DALVHWCKSR GLAARPLDLV GYGDEDEDVG MPASEAAEA
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