Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0779 |
Symbol | |
ID | 4021253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 874828 |
End bp | 875979 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960969 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_567918 |
Protein GI | 91975259 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0441144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGA CCAAGACACT GATCGTCGCG CTGGCGACGA TGCTGGCGGG CGTCACCGCG GCGCAAGCGG AGATCAAGAT CGGCATCACC ATGAGCGCGT CCGGCCCCGG CGCAGCGCTC GGCCAGCCGC AGTCGAAGAC GGTGGCGGCG CTACCCAAGG AAATCGGCGG CGAGAAGGTC ACCTACTTCG CGCTTGACGA CGAATCCGAT CCGACCAAGG CCGCGCAGAA CGCCCGCAAG CTGCTCTCGG AGGAAAAGGT CGATGTGCTG ATCGGCTCGT CGCTGACCCC GGTCAGCCTG CCGCTGATCG ACATCGCCGC CGAAGCCAAG ACGCCGCTGA TGACGATGGC GGCCGCCGCG ATCCTGGTCG CGCCGATGGA TGACCGCCGC AAATGGGTCT ACAAGGTGGT GCCGAACGAC GACATCATGG CGGAGGCGAT CGGCAAGTAC ATCGCCAAGA CCGGCGCCAA GAAGGTCGGC TATATCGGTT TCTCGGACGC TTACGGCGAG GGCTACTACA AGGTGCTGGC CGCCGCCGCG CCGAAACTCG GCTTCGAACT CACCACCCAT GAGGTCTATG CCCGCAGCGA CGCCAGCGTC ACCGGTCAGG TGCTGAAGAT CATCGCGACC AAGCCCGACG CTGTGTTCAT CGCGGCCGCC GGCACGCCGG CGGTGCTGCC CCAGAAGGCG TTGCGCGAGC GCGGCTTCAA GGGACCGATC TATCAGACCC ACGGCGTCGC CACTGAAGAG TTCATCAAGC TCGGCGGCAA GGACGTCGAA GGCGCGATCT TCGCCGGCGA GGCGTTCAGC GGCGCCGAGG ACATGCCGGC CGACAGTCCG TTCCGCAAGG TCAAGGCGCG CTTCGTCGAC GCCTACAAGG CCGCCAATGG CGGCGCGTCG CCGACCATCT TCGGCGTGCA TCTGTGGGAC TCGGTGACGC TGGTCGAGAA CGCGATCCCG GCAGCGCTCA AGGTCGCCAA GCCCGGCACG CCGGAATTCC GCGCTGCGAT CCGTGACCAG ATCGAGAAGT CGAAAGACCT CGCGCTCAAT AACGGCCTGT CGAACATGAC GCCCGACAAC CACAATGGCT ACGACGAACG ATCCGCCGTC CTGATCGAAA TCCGCGACGG CGCGTTCCGG TTGAAGCAAT AG
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Protein sequence | MQQTKTLIVA LATMLAGVTA AQAEIKIGIT MSASGPGAAL GQPQSKTVAA LPKEIGGEKV TYFALDDESD PTKAAQNARK LLSEEKVDVL IGSSLTPVSL PLIDIAAEAK TPLMTMAAAA ILVAPMDDRR KWVYKVVPND DIMAEAIGKY IAKTGAKKVG YIGFSDAYGE GYYKVLAAAA PKLGFELTTH EVYARSDASV TGQVLKIIAT KPDAVFIAAA GTPAVLPQKA LRERGFKGPI YQTHGVATEE FIKLGGKDVE GAIFAGEAFS GAEDMPADSP FRKVKARFVD AYKAANGGAS PTIFGVHLWD SVTLVENAIP AALKVAKPGT PEFRAAIRDQ IEKSKDLALN NGLSNMTPDN HNGYDERSAV LIEIRDGAFR LKQ
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