| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0775 |
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| Symbol | |
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| ID | 4021249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 869646 |
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| End bp | 871058 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960965 |
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| Product | major facilitator transporter |
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| Protein accession | YP_567914 |
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| Protein GI | 91975255 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.589082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAGA CCCTTGCCGC CGCCGATTCC TCGCGCCGTT GGCGGGTGCT GGCGATCGTC
GTCGCCGCGC AGTTCATGTT CGGGGTGGAC TCCTTCATCG TCAACGTCGC GATCCCGACG
ATCTCGACCG AACTGAACGC CTCGTCGTCG CAGATCGAGG CAGTGATCGC GATCTATCTG
ATCGGCTATG CGACGTTGAT CGTCACCGGC GGCCGGCTCG GCGATATCTA CGGGACCAAG
ACGGTGTTTC TCGCCGGCGT GTTCGGTTTC ACGCTGACCT CGCTGTGGTG CGGGCTGGCG
CAATCCGGCC CCGAGCTGAT CCTGGCGCGG CTGGCGCAGG GCGCTACCGC GGCGCTGATG
GTGCCGCAGG TGCTGGCGAC GCTGCACGTC CTGTTTCCCG ACGCCGACCG CGCCAAAGCT
TTCGCGATCT ACGGGATCGT CCTCGGCCTC GCCGGCGCGG CCGGCTTCGC GCTCGGCGGC
CTGTTGGTGA CGCTCGATCT CGGCGGCTAC GGCTGGCGAT CGATCTTCTT CGTCAATATC
CCGGTCGGGC TGGTCATTCT CGCCGCCGCG GCGTGGGTGG TTCCGCAGGC GCCGCGTCGT
CCCGCTACGC GGCTCGATCT GCCGGGCGCG GTGATTCTGT TCACCGGATT GCTGTGCGTG
ATCGGCCCGC TGCTGTTCGG CCGCGAGGTC GACTGGGCGG GGTGGATCTG GCTGGTGATC
GCCGGAGGCG TCGCCATCGT GCTGTTGTTC CTGCGCTACG AGCGGGCGCT CGCCGCGCGC
GGCGGCATGC CGTTGATCGA TCTCGGCCTG CTCGCTGATC CGGCCTTCAT GCGCGGGCTC
GGCGCGGTGT TCTTTTTCTT CTTCGCCAAC CAGTCGTTCT ATCTGGTGGT GACGCTGTAC
ATGCAGATAG TGCTCAAGAT TCCGCCGTTG CCGGCCGGGC TGGTATTCCT GCCGCTGGCT
CTGGCTTTCG TGATCGCGGC GCGGCACTCC GGCGCGCGTG CCCGGCGGCG CGGGACGCTG
GTGCTGATCG AAGGCTGCCT GCTGCAGATC GCCGGCCTCG CGCTCGTCGC ACTGACTGTC
GCCGTCATCG CAGCGCCGAC GCCGTTCATG TTGGCGCTGG CGCTGATCGT GGTCGGCTAC
GGTCAGGGGC TGGTGATGGC GCCGCTGTCC GGCGCGGTGC TGTCGACGGT GCAGGCGACC
AGCGCCGGCT CCGGGTCCGG CCTCTACGGA ACCACCACCC AGATCTCCAG CGCAGCCGGC
ATCGCCGCGA TCGGATCGAT CTACTTCGCG CTGGCGGAAG CCTCCTCCGG CCGCTTCGCG
CTGCTGGTCG CGCTGGCATT GATCGCCGGC TCGGTCGCCG GCAGCGCTAT TTTGCTGCGG
TGGATGCGAC GGGCGACTTT GGTCCCATCG TAG
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| Protein sequence | MHQTLAAADS SRRWRVLAIV VAAQFMFGVD SFIVNVAIPT ISTELNASSS QIEAVIAIYL
IGYATLIVTG GRLGDIYGTK TVFLAGVFGF TLTSLWCGLA QSGPELILAR LAQGATAALM
VPQVLATLHV LFPDADRAKA FAIYGIVLGL AGAAGFALGG LLVTLDLGGY GWRSIFFVNI
PVGLVILAAA AWVVPQAPRR PATRLDLPGA VILFTGLLCV IGPLLFGREV DWAGWIWLVI
AGGVAIVLLF LRYERALAAR GGMPLIDLGL LADPAFMRGL GAVFFFFFAN QSFYLVVTLY
MQIVLKIPPL PAGLVFLPLA LAFVIAARHS GARARRRGTL VLIEGCLLQI AGLALVALTV
AVIAAPTPFM LALALIVVGY GQGLVMAPLS GAVLSTVQAT SAGSGSGLYG TTTQISSAAG
IAAIGSIYFA LAEASSGRFA LLVALALIAG SVAGSAILLR WMRRATLVPS
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