| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0736 |
|---|
| Symbol | |
|---|
| ID | 4021209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 826279 |
|---|
| End bp | 828474 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637960925 |
|---|
| Product | copper-translocating P-type ATPase |
|---|
| Protein accession | YP_567875 |
|---|
| Protein GI | 91975216 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGA CGCGGGATTT CTCTCACTAC GTCAAGGAAG TCGATCAGCA GATCGCGCAT
CTCGATCTCG CGGTCGAAGG CGTGAGCTGC GCCGGCTGCA TGGCGAAAAT CGAGCGCGGC
CTGTCCGCCA TTCCCGACGT GACGCTGGCG CGCGTCAACC TCACCGACCG CCGCCTCGCG
GTGGAGTGGA AGAAGGGCGC CCTGGAGCCG GCGCTGTTCA TCGATCGGCT CGCCGAGCTA
GGCTACAAGG CCTATCCTTA CGAGCCGGTC CGCGCCGAAG TCGAAGAGGC CGAGCGGTCG
AAGTTCCTGC TGCGCTGCCT CGGCGTCGCC GCCTTCGCGA TGATGAACGT GATGATGCTG
TCGGTGCCAG TGTGGGTCGG CGGCGATCTC AGCCCGGAAG CGCGCGATTT CTTCCACTGG
TTGTCGGCGC TGGTCGTGCT TCCCTGCGCG GCTTATGCGG GCCAGCCGTT CTTCCAGTCC
GCATGGCGCG CGCTGAAAGC GCGTAGCGTC AACATGGACG TGCCGATCTC GATCGGCGTG
GTGCTGGCGC TCGGCATGTC GCTGGTCGAG ACCATCCATC ACGCCGAGCA CACCTATTTC
GACGCGGCCA TCATGCTGAT CACATTCCTT CTGGCGGGGC GCTTCCTCGA CCAGAAGATG
CGCCAGCGGA CCCGCGCGGT GGCCGGCAAT CTCGCCGCGC TGAAGGCCGA GACCGCGACC
AAATTCGTCG GTCCGGACGA AATCAGCGAA GTGCCGATCG CCGCGGTGCG AACCGGCGAC
ATCGTGCTGT TGCGTCCGGG CGAGCGTTGC GCCGTCGACG GCAGCGTCGT CGAGGGCCGC
TCCGAGATCG ACCAGAGCCT GATCACCGGC GAGACGCTGT ATGTAAAGGC CGAGCGCGGC
ACCCAAGTCT ATGCCGGCAC GCTGAACATC TCCGGCACGC TGCGGGTCCG CGTCGCGGCG
GCGGCCGAAG GCACGCTGCT GTCGGAGATC ACGCGGCTGC TCGACCACGC GCTGCAGGCG
CGTTCGCGCT ACGTCCAGCT CGCCGACCGC GCCTCGCAGT ATTATGCGCC GGTGGTGCAC
GCCACCGCGC TGCTCACCGT GATCGGCTGG GTGCTGGCCG GCGCGAGCTG GCACGACGCC
ATCGTCATCG GCATCGCCGT GCTGATCATC ACCTGCCCCT GCGCGCTCGG GCTCGCGATT
CCGGCGGTGC AAACCGTGGC GTCCGGGGCG ATGTTCCGCG CCGGCGTGCT GCTCAACGCC
GGCGACGCGA TCGAGCGCGC CGCCGCCGTC GACACCATCG TGTTCGACAA GACCGGCACC
CTGACATTGC CCGAACTCGA CGTCGTCAAC GCCGCGAGCG TTCCCGACGA GGTGTTTCAG
CTTGCCGGAC GACTGGCGCT CGCCAGTCAT CATCCGGTCG CAGCCGCGGT GGCGCGTGCG
GCCCAGGCGA GGTCGCCGAT CCCCGGCGTG ACCGAGGAGC CCGGTCGCGG CGTGCGCGCC
ATGTTCGAAG GCGAGGAGTT GCGACTGGGT AGTCCGGCGT TTTGCGGCGC AGATTTCCAG
GCCAACGCCA TCCTGAGCGA AGATCCGGAA GTCTCGGTCG TCGCGTTCAG CCGCGGCGAT
CAGCGCACGG TGTTCGCTGT CCGGCAGTTG CTGCGGCCCG ACGCCGCGAG GACGATCGAC
GCGCTGACGA ACCGCGGCAT CAGCGTCGAA TTGCTGTCCG GCGATCGCGA GCCGGCGGTG
CGGCACGCAG CCGACGCACT CGGCGTCAGC GCATGGCGCG CCGGCGTCAC GCCGGCCGAG
AAGATCGCCC ATATCGAGGC GCTGAAGCGC CAGGGCCGCG TGGTGATGAT GGTCGGCGAC
GGCATGAACG ACGCGCCGTC GCTCGCCGCA GCTCACGTGT CGATGTCGCC GATCAGCGCC
TCGCATCTCA GCCAGGCGAC CGCCGATCTG GTGTTCCTCG GCAAGGAACT GGCGCCGGTG
TTGGCAGCGG TCGATTACTC GCGCAAGGCG AGGGCGGTGA TGCGGGAGAA TCTGGGGCTG
GCGATCGGCT ACAACATTCT CGCGGTGCCG ATCGCGATCG CCGGCCTCGC AACGCCGCTG
ATCGCCGCGC TGGCGATGTC GGGCTCGTCG ATCCTGGTGA TGCTGAATGC GATGCGCGCC
CGTCGGGTCC GCCTGGGAGG TGCGTCATGG AAGTGA
|
|---|
| Protein sequence | MLLTRDFSHY VKEVDQQIAH LDLAVEGVSC AGCMAKIERG LSAIPDVTLA RVNLTDRRLA
VEWKKGALEP ALFIDRLAEL GYKAYPYEPV RAEVEEAERS KFLLRCLGVA AFAMMNVMML
SVPVWVGGDL SPEARDFFHW LSALVVLPCA AYAGQPFFQS AWRALKARSV NMDVPISIGV
VLALGMSLVE TIHHAEHTYF DAAIMLITFL LAGRFLDQKM RQRTRAVAGN LAALKAETAT
KFVGPDEISE VPIAAVRTGD IVLLRPGERC AVDGSVVEGR SEIDQSLITG ETLYVKAERG
TQVYAGTLNI SGTLRVRVAA AAEGTLLSEI TRLLDHALQA RSRYVQLADR ASQYYAPVVH
ATALLTVIGW VLAGASWHDA IVIGIAVLII TCPCALGLAI PAVQTVASGA MFRAGVLLNA
GDAIERAAAV DTIVFDKTGT LTLPELDVVN AASVPDEVFQ LAGRLALASH HPVAAAVARA
AQARSPIPGV TEEPGRGVRA MFEGEELRLG SPAFCGADFQ ANAILSEDPE VSVVAFSRGD
QRTVFAVRQL LRPDAARTID ALTNRGISVE LLSGDREPAV RHAADALGVS AWRAGVTPAE
KIAHIEALKR QGRVVMMVGD GMNDAPSLAA AHVSMSPISA SHLSQATADL VFLGKELAPV
LAAVDYSRKA RAVMRENLGL AIGYNILAVP IAIAGLATPL IAALAMSGSS ILVMLNAMRA
RRVRLGGASW K
|
|---|
| |