| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0733 |
|---|
| Symbol | |
|---|
| ID | 4021206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 823280 |
|---|
| End bp | 824161 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637960922 |
|---|
| Product | cytochrome c oxidase, cbb3-type, subunit III |
|---|
| Protein accession | YP_567872 |
|---|
| Protein GI | 91975213 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.647452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC ACTCACATCA CGCCGAGATC GACAAGGTCA CCGGCACCGC CACGACCGGC
CATGAATGGG ACGGCATCAA GGAACTGAAC ACGCCGCTGC CGCGGTGGTG GATCTGGACC
TTCTACGCGA CCATCGTCTG GTCGCTCGGC TACTTCGTCG TGTACCCGGC CTGGCCGCTG
GTCGACGGTT ACACCAAGGG TCTGTTCGGC TACTCCTCGC GCGCCGAACT CGCGGTCGAA
CTCGCCAAGC TCGACGCGGT GCGCGGCGGA AAGATGGCCG TGCTCGCCAC CGCGCCGCTC
GCCGATATCG AGAAGGACCC GGGGCTGCTG GCGCTGGCTC GCGCCAAGGG CAAGGTGGTG
TTCGGCGACA ACTGCGCCCC GTGCCACGGT TCCGGCGCCG CCGGCTCGAA GGGCTTCCCG
AACCTCAACG ACGACGATTG GCTGTGGGGC GGGTCGCTCG AGCAGATCGA GCAGACCATC
AAGTACGGCG CTCGCTCGGG TCACGACGAT GCCCACCAGG GCAACATGCC GGCATTCGGC
AAGGACGGCC TCCTGACCGC GGAGCAGATC GTCACCGTCG TCAACTACGT CCGGTCGCTG
TCGGGTCTTT CGACACGGCC CGGCAGCGAT CTCGCCGCCG GCAAGCAGGT TTTCGCAGAG
ACTTGCTCGT CGTGTCACGG CGACGAGGCG AAGGGCAATC CGGAACTCGG CTCGCCCAAC
CTGACCGACA AGATCTGGCT CTACGGCTCG GATGAGGCTA CCATGATCGA TACCTTGACC
AACGGCCGTG GCGGCGTGAT GCCGGCCTGG GCGGGGCGTC TCGATCCCGC GACCATCAAG
GCGATGACGG TGTACGTGCA CTCGCTCGGC GGCGGCAAAT AA
|
|---|
| Protein sequence | MADHSHHAEI DKVTGTATTG HEWDGIKELN TPLPRWWIWT FYATIVWSLG YFVVYPAWPL
VDGYTKGLFG YSSRAELAVE LAKLDAVRGG KMAVLATAPL ADIEKDPGLL ALARAKGKVV
FGDNCAPCHG SGAAGSKGFP NLNDDDWLWG GSLEQIEQTI KYGARSGHDD AHQGNMPAFG
KDGLLTAEQI VTVVNYVRSL SGLSTRPGSD LAAGKQVFAE TCSSCHGDEA KGNPELGSPN
LTDKIWLYGS DEATMIDTLT NGRGGVMPAW AGRLDPATIK AMTVYVHSLG GGK
|
|---|
| |