Gene RPD_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0600 
Symbol 
ID4021069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp677907 
End bp679256 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content65% 
IMG OID637960788 
ProductATP-binding region, ATPase-like 
Protein accessionYP_567739 
Protein GI91975080 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGACA AAACCGCGCC GGCGCGCTTG CGGCCGCGCC TCGGCGACGA TGTGACGCTT 
TCGCCGGCAG CGTCGTCACC CGCCGACGAC GCAACCGACC GCAAGAACAT GTCGCTGCTG
ATCCAGCTCC GCTGGACCGC GGTGATCGGT CAGATCGTCA CCATCGGCGC AGTCCATTTG
TGGCTCGGCG CTCCGCTGCC GGTCGTGCCG ATGGGCGCGG TCGTGCTCGG GCTGATCGCG
CTCAATATCG GCAGCCTGGC GTGGATGCGT TATCGCGTGG CGGTCAGCAA TCGCGACCTG
CTGATCGCGC TGATCCTCGA TGTCGTCGCG CTCACCGCCC AGCTCTATCT CAGCGGCGGC
ATCACCAATC CGTTCACGTC CTTGTATCTG CTGCAGGTGA CGCTCGGCGC CGTGTTGCTC
GACAGCCGCG CGAGCTGGTC GCTGGTTGCG GTCGTGTTCG CGGCGTTCAT CTGGCTCACC
GGGGCGTCGC GGCCGCTGGT GTTGCCGCAG ACCGCCGGCG ATCCGGTCAA TCTGACCGTC
GCCGGAATGC TGATCGGCTT CGCGCTGAAT GCCGTTCTGC TGGTGGTGTT CGTCACCCGC
ATCCATCGCA ATCTGCGCGA ACGCGACGCG CATCTGGCGG CGCTGCGCCA GCATGCGGCG
GAACAGGATC ACATCGTGCG AATGGGCCTG CTGGCGTCCG GCGCGGCGCA CGAACTCGGC
ACGCCGCTGG CGTCGGTCTC GGTCATTCTC AGCGATTGGC GACGGATGCC CGCGCTGACG
GAGAACCGCG AACTCGCCGA GGATCTCACC GAAATGGAGA CCTCGCTGAA GCGGTGTCAG
TCGATCGTGA CCGGAATTCT GGTCTCCGCC GGCGAAGCGC GCGGCGAGGG CTCGTCGCCG
ACCACGGTGG CCGAATTCCT GTCTGCGATC GCCGAGGAAT GGCGGAACGC GCGCTGCAAG
ACCACGTTAC ACGTCGTCAA CGTGTTCGGA GAGGACCTGC CGATCGTCTC GGACGTGACG
CTGAAACAGG CGATCTTCAA CGTTCTCGAC AACGCCTTCG AGGTCTCGCG CCACTGGATC
GAACTGGTCG CAGAACGCGA CGGCGACGAT CTGGTGCTGT CGATCATCGA TCGCGGGCCG
GGCTTTTCGA AGGACATGCT GACGCAGATC GGCAAGCCTT ATCAATCCAG CAAGGGGCGG
GTCGGCGGCG GTCTCGGCCT GTTCCTGGTG ATGAACGTGG TGCGCAAGCT CGGCGGTTCG
ATGACAGCCG AGAATCTTCA CAACCGCGGC GCCAAGGTCA AGCTGGTGTT GCCGCTGAAG
ACGCTCGCGA TCGGAGACGA CTTTGACTGA
 
Protein sequence
MQDKTAPARL RPRLGDDVTL SPAASSPADD ATDRKNMSLL IQLRWTAVIG QIVTIGAVHL 
WLGAPLPVVP MGAVVLGLIA LNIGSLAWMR YRVAVSNRDL LIALILDVVA LTAQLYLSGG
ITNPFTSLYL LQVTLGAVLL DSRASWSLVA VVFAAFIWLT GASRPLVLPQ TAGDPVNLTV
AGMLIGFALN AVLLVVFVTR IHRNLRERDA HLAALRQHAA EQDHIVRMGL LASGAAHELG
TPLASVSVIL SDWRRMPALT ENRELAEDLT EMETSLKRCQ SIVTGILVSA GEARGEGSSP
TTVAEFLSAI AEEWRNARCK TTLHVVNVFG EDLPIVSDVT LKQAIFNVLD NAFEVSRHWI
ELVAERDGDD LVLSIIDRGP GFSKDMLTQI GKPYQSSKGR VGGGLGLFLV MNVVRKLGGS
MTAENLHNRG AKVKLVLPLK TLAIGDDFD