Gene RPD_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0558 
Symbol 
ID4021026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp631618 
End bp632493 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content64% 
IMG OID637960745 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_567697 
Protein GI91975038 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.174095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAC TTAAAGACAT GCGCGTCCGC ATCGCCTCGA CCAAGGCGAC GCAGAAGATC 
ACCAAGGCGA TGCAGATGGT CGCGGCTTCG AAGCTGCGCC GCGCCCAGAT GGCGGCGGAA
GCCGCGCGGC CCTATGCCGA AAAGATGGAC GCGGTGATCT CGAACATCGC CGGCGCCGCT
GCGGGCTCGC CCGGCGCACC GGTGCTGCTC GCCGGCACCG GCAAGGATCA GGTTCACCTG
CTGCTGGTCT GCACCGGCGA GCGTGGCCTG TCCGGCGCGT TCAACTCGTC GATCGTCCGC
CTTGCCCGCG AACGCGCTTA CGCGCTGATG AACCAGGGCA AGACAGTCAA ATTCTTCTGC
GTCGGCCGCA AGGGCTACGA GCAGCTCCGC CGAACCTTCG ACAAGCAGAT CATCGAGAAC
ATCGAGCTGC GCTCGGTTCG CCAGCTCGGC TTCGTCAACG CCGAGGACAT CGCCCAGAAG
GTGATCGCCC GCTTCAACAA CGGCGAGTTC GACGTCTGCA CGCTGTTCTA TTCGCGCTTC
AAATCGGTGA TCTCGCAGAT CCCGACGGCG CAGCAACTGA TCCCGCTGGT GGTCGAGGCG
CCGGCTGCAG GCTCCGTGGC CACCTCCTAC GAATACGAGC CGGAAGAGGA CGAGATCCTC
TCCACGCTGC TGCCGCGCAA TCTCGCGGTG CAGATCTTCC GCGCGCTCCT GGAAAACAAC
GCGTCGTTCT ACGGCGCCCA GATGAGCGCG ATGGACAACG CCACCCGCAA CGCCGGCGAC
ATGATCAGGA AGCAGACGCT GATCTACAAC CGCACCCGGC AGGCGATGAT CACCAAGGAG
CTGATCGAGA TCATCTCGGG CGCCGAGGCG ATCTAG
 
Protein sequence
MASLKDMRVR IASTKATQKI TKAMQMVAAS KLRRAQMAAE AARPYAEKMD AVISNIAGAA 
AGSPGAPVLL AGTGKDQVHL LLVCTGERGL SGAFNSSIVR LARERAYALM NQGKTVKFFC
VGRKGYEQLR RTFDKQIIEN IELRSVRQLG FVNAEDIAQK VIARFNNGEF DVCTLFYSRF
KSVISQIPTA QQLIPLVVEA PAAGSVATSY EYEPEEDEIL STLLPRNLAV QIFRALLENN
ASFYGAQMSA MDNATRNAGD MIRKQTLIYN RTRQAMITKE LIEIISGAEA I