Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0520 |
Symbol | |
ID | 4020988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 591670 |
End bp | 592269 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637960707 |
Product | periplasmic protein thiol |
Protein accession | YP_567659 |
Protein GI | 91975000 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.797158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CCGTACCCGA CGCCCCCTCC CCGAAGCGCC GCTCGCTTGT GGTCGCGCTG CCGCTGCTGG TGTTCGCCGG ACTGGCGGCG CTGTTCTGGT TCAGGCTCGG CGATCGCGAT ATTTCGAGGA TACCGTCGGC GCTGATCGGC CGCGAGGCTC CGTCGACCAC GTTGCCGTCG CTGGAAGGCC TTACCCGGGA CGGCGTCCAG GTCGCCGGCC TCGACCCGGC GCTGTTTAGG GGCAAGGTCA GCGTCGTCAA TGTCTGGGCG TCGTGGTGCG TGCCGTGTCA CGACGAGGCG CCGCTTTTGA CCGCGCTCGC CGATGACAAG CGCATCCAGA TCGTCGGCAT CAACTACAAG GACAAGCCCG ACAACGCCCG ACGCTTCCTC GGCCGCTATG GTAATCCGTT CGTCGCCGTC GGCGTCGACC CCAATGGTCG CGCCGCGATC GAGTGGGGCG TGTATGGCGT GCCGGAGACT TTCGTGGTCG GGCGCGACGG CAGGATCGCC TACAAGCTGG TCGGCCCGAT CACGCCGGAC AATCTCGACA AGCTCCTCAA GGCCGAGATC GGCAAGGCGC TCGCCGCGCC GCAGAGTTAG
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Protein sequence | MSTPVPDAPS PKRRSLVVAL PLLVFAGLAA LFWFRLGDRD ISRIPSALIG REAPSTTLPS LEGLTRDGVQ VAGLDPALFR GKVSVVNVWA SWCVPCHDEA PLLTALADDK RIQIVGINYK DKPDNARRFL GRYGNPFVAV GVDPNGRAAI EWGVYGVPET FVVGRDGRIA YKLVGPITPD NLDKLLKAEI GKALAAPQS
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