| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0478 |
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| Symbol | sdhB |
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| ID | 4020946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 552188 |
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| End bp | 552970 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960665 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_567617 |
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| Protein GI | 91974958 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.617159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.371363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGAAT TCGCACTTCC GAAGAATTCG AAGATTGTCG GCGGCAAAGC CTGGCCGAAG
CCGGAAGGCG CGACCGAAGT GCGCGAATTC CGCGTCTATC GCTGGAATCC CGACGACGGC
AACAACCCGA GCATCGACAC CTATTACGTC GACAAGCACG ATTGCGGCCC GATGGTTCTC
GACGGCCTGA TCTGGATCAA GAACAACATC GATCCGACGC TAACCTTCCG CCGCTCCTGC
CGCGAAGGCG TCTGCGGCTC CTGCGCGATG AACATCGACG GCGAGAACAC GCTGGCCTGC
ACCAAGGCGA TGGACGACGT CCGCGGCGAC GCGGTCAAGG TTACGCCGCT GCCGCACCAG
CCGGTGGTGA AGGATCTGGT GCCCGACCTC ACCAATTTCT ACGCGCAATA CGCCTCGATC
CAGCCCTGGC TGCAGACCGT GACGCCGACG CCGCAGAAGG AATGGCGGCA GAGCCACGAC
GACCGCGAGA AGCTCGACGG CCTGTACGAA TGCATCCTGT GCGCCTGCTG CTCGACCTCG
TGCCCCAGCT ATTGGTGGAA TTCCGACCGC TTCCTGGGAC CGGCGGCGCT GCTACAGGCG
ACCCGCTGGG TCGAGGACAG CCGCGACGAG GCCACCGGCG AACGGCTCGA CAATCTCGAG
GATCCGTTCC GGATCTATCG CTGCCACACC ATCATGAACT GCGCCAAGGC GTGCCCGAAG
GGCCTCAACC CGTCGGAAGC GATCGCCAGT CTCAAGCTCA AGCTGGTCGA ACGCCAGATC
TGA
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| Protein sequence | MVEFALPKNS KIVGGKAWPK PEGATEVREF RVYRWNPDDG NNPSIDTYYV DKHDCGPMVL
DGLIWIKNNI DPTLTFRRSC REGVCGSCAM NIDGENTLAC TKAMDDVRGD AVKVTPLPHQ
PVVKDLVPDL TNFYAQYASI QPWLQTVTPT PQKEWRQSHD DREKLDGLYE CILCACCSTS
CPSYWWNSDR FLGPAALLQA TRWVEDSRDE ATGERLDNLE DPFRIYRCHT IMNCAKACPK
GLNPSEAIAS LKLKLVERQI
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