Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0431 |
Symbol | gidB |
ID | 4020897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 497049 |
End bp | 497750 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637960616 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_567570 |
Protein GI | 91974911 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCAC GACAATCACC GATGGCAGTC TCTCAACCGG ACCATGCCGA CAGATCTGCC GCGTTGCAGC TCACGCCCGT TTCACGTGAA ACAGAGCGGC GGCTCGACGC CTATCTCGAT TTGCTGCGGC AATGGCAGGC CAAGACCAAT CTGGTCGCGC CCTCGACGCT GCCGCAGCTC TGGACCCGTC ACGTCGCGGA TTCGCTGCAG CTTCTGACGC TGGCGCCCGA CGCGCGGCGA TGGCTCGACT TCGGCAGCGG CGGCGGCTTT CCTGGCATCG TGCTGGCCTG CGCGATGGCC GAGCACGACG GTGGTCACGT CACGCTGGTC GAGCGCAACG CCAAAAAGGC GGCCTTTCTG CGCGAGGCGC TGCGGGTGAC CGGCTCGCCC GGCACAGTCA TGCTCGCGGA CATCGGGGAT AACGTGGATA GATTTCCACA AGGCCTCGAT TGCATCACCG CGCGCGCGGT TGCTCCGCTA CACCAGCTGA TCGGTTTCGC CCGACCGTTG ATGACCGAAG GCAGCAAGGC GCTGTTCCTG AAGGGTCAAG ATGTAGAAGC TGAATTGACC GAAGCTACTA GATATTGGAA GATTGACCCT CAATTGCACG CCAGCCTGAC CGGTGGACAT GGCTGGATTG TCGAAATCGA CCGGATCGAA CGTCAAGCCC TCCCCACCGC CAGCAAAGAA GCCGCGCAAT GA
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Protein sequence | MASRQSPMAV SQPDHADRSA ALQLTPVSRE TERRLDAYLD LLRQWQAKTN LVAPSTLPQL WTRHVADSLQ LLTLAPDARR WLDFGSGGGF PGIVLACAMA EHDGGHVTLV ERNAKKAAFL REALRVTGSP GTVMLADIGD NVDRFPQGLD CITARAVAPL HQLIGFARPL MTEGSKALFL KGQDVEAELT EATRYWKIDP QLHASLTGGH GWIVEIDRIE RQALPTASKE AAQ
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