| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0416 |
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| Symbol | |
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| ID | 4020882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 481225 |
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| End bp | 481806 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960601 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_567555 |
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| Protein GI | 91974896 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGT ATTCCGCTTC GGGCGAAGGC TCGCCCCAAG GCTCCGCTCA GGTCTGGCAC
GGCACCACGA TTCTCACCGT CCGCAAGGGC GGCAAGGTAG TGATCGGCGG CGACGGCCAG
GTCTCGATCG GCCAGACCGT GATCAAGGCC AATGCCAAGA AGGTTCGCAA GCTCGGCAAG
GGCGACGTGA TCGGCGGCTT CGCGGGCGCC ACCGCGGATG CCTTCACGCT GTTCGAGCGG
CTCGAAGCCA AGCTCGAACA ATATCCGGGT CAATTGACCC GCGCCGCAGT CGAGCTCGCC
AAGGACTGGC GCACCGACCG CTATCTGCGG CGCCTGGAAG CGATGATGAT CGTCGCCGAC
AAGGACGTCT CGCTGGTGCT GACCGGCACC GGCGACGTGC TCGAGCCCGA ATACGGCGTG
ATGGCGATCG GTTCCGGTGG AAATTATGCG CTCGCCGCGG CGAGGGCGCT GGCCGACACC
GACCAGGACG CCGAGACCAT CGTCCGCAAG GCGCTCGATA TCGCCGCCGA CATCTGCGTC
TACACCAACC GCAACCTGAC GCTCGAGACG CTGTCCGCGT GA
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| Protein sequence | MNMYSASGEG SPQGSAQVWH GTTILTVRKG GKVVIGGDGQ VSIGQTVIKA NAKKVRKLGK
GDVIGGFAGA TADAFTLFER LEAKLEQYPG QLTRAAVELA KDWRTDRYLR RLEAMMIVAD
KDVSLVLTGT GDVLEPEYGV MAIGSGGNYA LAAARALADT DQDAETIVRK ALDIAADICV
YTNRNLTLET LSA
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