Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0413 |
Symbol | hisH |
ID | 4020879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 479255 |
End bp | 479905 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960598 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_567552 |
Protein GI | 91974893 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG CGATCATCGA CTATGGCTCC GGCAATCTGC ACTCGGCCGC GAAGGCGTTC GAGCGCGCTG CGCGCAGCAT GGAAGTGCCG GAAAAGATCA TCGTCACCCG CGATCCCGAA CAAGTGTTCC GCTCCGATCG GGTGGTGCTG CCGGGCGTCG GCGCCTTCGC CGACTGCCGC AAGGGCCTCG ACGCGGTCGA CGGCATGGTC GAGGCGCTGA CCGAGACGGT GCGGGTCAAG GCGCGGCCGT TCTTCGGCAT CTGCGTCGGG ATGCAGTTGA TGGCGACCCG CGGCAAGGAG CACGTCACCA CCGACGGGCT GAACTGGATT CCCGGCGACG TCGTCAAGAT CACGCCCAAC CAGGAAGAGC TGAAGATCCC GCATATGGGC TGGAATACGC TCGACGTGCT GCGCGAGCAT CCGGTGCTGG AGCGGCTGCC GCTTGGGCCG AACGGCCTGC ACGCCTATTT CGTGCATTCC TTCCACCTCG CGGCGCAAAG CGAGGGCGAT GTGCTGGCGC GCGCCGATTA TGGCGGACCG GTCACCGCGG TGGTCGGTCG CGACACCGCG ATCGGCACCC AGTTTCACCC CGAGAAAAGC CAGCGCTTCG GCCTGGCGCT GATCTCGAAT TTTCTCAAGT GGAAGCCGTG A
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Protein sequence | MSVAIIDYGS GNLHSAAKAF ERAARSMEVP EKIIVTRDPE QVFRSDRVVL PGVGAFADCR KGLDAVDGMV EALTETVRVK ARPFFGICVG MQLMATRGKE HVTTDGLNWI PGDVVKITPN QEELKIPHMG WNTLDVLREH PVLERLPLGP NGLHAYFVHS FHLAAQSEGD VLARADYGGP VTAVVGRDTA IGTQFHPEKS QRFGLALISN FLKWKP
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