Gene RPD_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0413 
SymbolhisH 
ID4020879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp479255 
End bp479905 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID637960598 
Productimidazole glycerol phosphate synthase subunit HisH 
Protein accessionYP_567552 
Protein GI91974893 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG CGATCATCGA CTATGGCTCC GGCAATCTGC ACTCGGCCGC GAAGGCGTTC 
GAGCGCGCTG CGCGCAGCAT GGAAGTGCCG GAAAAGATCA TCGTCACCCG CGATCCCGAA
CAAGTGTTCC GCTCCGATCG GGTGGTGCTG CCGGGCGTCG GCGCCTTCGC CGACTGCCGC
AAGGGCCTCG ACGCGGTCGA CGGCATGGTC GAGGCGCTGA CCGAGACGGT GCGGGTCAAG
GCGCGGCCGT TCTTCGGCAT CTGCGTCGGG ATGCAGTTGA TGGCGACCCG CGGCAAGGAG
CACGTCACCA CCGACGGGCT GAACTGGATT CCCGGCGACG TCGTCAAGAT CACGCCCAAC
CAGGAAGAGC TGAAGATCCC GCATATGGGC TGGAATACGC TCGACGTGCT GCGCGAGCAT
CCGGTGCTGG AGCGGCTGCC GCTTGGGCCG AACGGCCTGC ACGCCTATTT CGTGCATTCC
TTCCACCTCG CGGCGCAAAG CGAGGGCGAT GTGCTGGCGC GCGCCGATTA TGGCGGACCG
GTCACCGCGG TGGTCGGTCG CGACACCGCG ATCGGCACCC AGTTTCACCC CGAGAAAAGC
CAGCGCTTCG GCCTGGCGCT GATCTCGAAT TTTCTCAAGT GGAAGCCGTG A
 
Protein sequence
MSVAIIDYGS GNLHSAAKAF ERAARSMEVP EKIIVTRDPE QVFRSDRVVL PGVGAFADCR 
KGLDAVDGMV EALTETVRVK ARPFFGICVG MQLMATRGKE HVTTDGLNWI PGDVVKITPN
QEELKIPHMG WNTLDVLREH PVLERLPLGP NGLHAYFVHS FHLAAQSEGD VLARADYGGP
VTAVVGRDTA IGTQFHPEKS QRFGLALISN FLKWKP