Gene RPD_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0382 
Symbol 
ID4020848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp449106 
End bp449621 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content62% 
IMG OID637960567 
Producthypothetical protein 
Protein accessionYP_567521 
Protein GI91974862 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAG ACACCGATCT TGATCCGGAA TTGGCGCAGC CGAAACTGTT TTCGGCGCTG 
CTGAAGCCGC ATCGCGCATT GAGTCACAAG GCTTTTTTGG TGCTGATGGG AGTCCTCGGC
ACGATCAGCT TCGCCGTCGG CGTAGGCTTC TGGACGATGG GCGCGTGGCC GGTGTTCGGT
TTCTTCGGCC TCGACCTGCT GGCGATCTAT ATCGCCTTCA GGATCAGCTT CGCCCGTGGC
CGCGCCAGCG AGGAAATCTC GATCACGATC AGCGAGTTAC GGGTCCGTCG CATTTCGCAT
CGCGGTCACG TGGCGGAGTG GGTGCTGAAT CCGCTCTGGG TCCGGCTGGA GAAAATCGTC
CACGCCGAGT TCGGCATCGA GCAGCTTTAT CTGGTCTCGC GCGGCCGCCG CGTCAGCGTC
GCGAGTTTTC TCGGAGCCGA AGAAAAAGCT AGCTTCGCCA ACGCCTTGAC CGCCGCCTTG
GATGCCGCGC GGCGCGGCCC GCTGGTTCGG CATTGA
 
Protein sequence
MALDTDLDPE LAQPKLFSAL LKPHRALSHK AFLVLMGVLG TISFAVGVGF WTMGAWPVFG 
FFGLDLLAIY IAFRISFARG RASEEISITI SELRVRRISH RGHVAEWVLN PLWVRLEKIV
HAEFGIEQLY LVSRGRRVSV ASFLGAEEKA SFANALTAAL DAARRGPLVR H