| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0356 |
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| Symbol | |
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| ID | 4020821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 420259 |
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| End bp | 421437 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637960540 |
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| Product | isovaleryl-CoA dehydrogenase |
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| Protein accession | YP_567495 |
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| Protein GI | 91974836 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.969667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000934354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCGAGC TGGCGTCTTT TGATTTTGAC CTCGACGAGC CAACGCGGAT GCTGCGCGAT
ACGGTCAGAA GCTTCGTGCA GGCGGAGCTT GCGCCTCGCG CCTATGCAAT CGAACAGGCC
AATGACTTTC CGGCAGATAT CTGGCGCAAA TTCGGCTCGA TGGGGCTGCT CGGTATTACC
GTCGACGAAG CCTATGGTGG TTCGGGCCTG GGCTACTTCG CCCATATCAT CGCGATGGAA
GAAATCTCGC GAGCCTCAGC CGCCGTCGGA ATGTCTTATG GGGCGCATTC GAATCTCTGC
GTCAACCAGA TCCACAGGAA CGGAACAGAG GCTCAGAAGC AGCGCTATCT TCCGAAGCTG
GTCTCTGGTG AGAATGTCGG CGCTCTTGCG ATGTCGGAGG CGGGCGCGGG TTCCGACGTC
GTTTCGATGA AGTTGCGTGC CGACAAGGTT GGCAGCAACT TCGTGCTGAA CGGCACCAAG
ATGTGGATTA CCAACGGCCC GAACGCAGAC ACCCTTGTCG TCTACGCGAA GACCGACCCG
GCCGCGAAAT CGAAGGGCAT CACGGCATTC ATTGTCGAGC GCGACTTCAA GGGCTTCTCG
ACCTCGCCCA AGCTCGACAA ACTGGGGATG CGCGGTTCGA ATACGTGCGA ACTCGTATTC
GACAATTGCG AGGTGCCCGA GGCGAATGTT CTCGGCGAAG TCGGGCAGGG TGTGCGGGTC
CTGATGTCGG GATTGGATTA TGAGCGTGCC GTGATGGCCG CGGGTCCGGT CGGCATCATG
GCCGCCTGCC TGGATCTGGT TGTGCCCTAT GCGCGCGATC GCAAGCAGTT TGGCCAGCCG
ATCGGAGAAT TCCAGTTTAT CCAGGGCAAG CTGGCCGACA TGTATACGGC CCAGATGACC
GCTCGCGCTT ATCTTTACGG AGTCGCGCGG GCCATCGACG GCAAAGTGCT GCAAGGTCAA
GCGGCCCGCA AGGACTGCGC CGCCGTCATC CTGTACGCTG CCGAGCAGGC CACCAAGGTC
GCAGCCGAGG CCATTCAGAT CATGGGTGGC AACGGTTACG TTAATGAATG CCCGGCCGGC
CGTTACTGGC GGGACGCGAA GATATTCGAG ATTGGCGCCG GCACGTCGGA AATCCGGCGC
ATGCTGATCG GACGGGAAAT CGTCAGGTCA TCAGCATGA
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| Protein sequence | MIELASFDFD LDEPTRMLRD TVRSFVQAEL APRAYAIEQA NDFPADIWRK FGSMGLLGIT
VDEAYGGSGL GYFAHIIAME EISRASAAVG MSYGAHSNLC VNQIHRNGTE AQKQRYLPKL
VSGENVGALA MSEAGAGSDV VSMKLRADKV GSNFVLNGTK MWITNGPNAD TLVVYAKTDP
AAKSKGITAF IVERDFKGFS TSPKLDKLGM RGSNTCELVF DNCEVPEANV LGEVGQGVRV
LMSGLDYERA VMAAGPVGIM AACLDLVVPY ARDRKQFGQP IGEFQFIQGK LADMYTAQMT
ARAYLYGVAR AIDGKVLQGQ AARKDCAAVI LYAAEQATKV AAEAIQIMGG NGYVNECPAG
RYWRDAKIFE IGAGTSEIRR MLIGREIVRS SA
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