| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0355 |
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| Symbol | |
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| ID | 4020820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 419471 |
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| End bp | 420262 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960539 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_567494 |
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| Protein GI | 91974835 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000760103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGTTGG TCTCTGCGGC GACAGAGCAG ACGCGAGATT GCGTCACAGG CGGGGACGCG
CGCGTGGTCC TCGTCACCGG CGGGGCTTCC GGAATCGGAC GAGCCGCAGC CCTTGCCTGG
GCGCGCCAGG GTTGCAGTGT CCTGGTTGCC GATATCGACG ATCGAGGCGG CGCCGAAACT
GTCGAGGCCA TCGAAAGGCT GGGCTCTCGC GCTCGCTACC AACGCAACGA TGTTACAGAT
GAGCGCGAAT GCGCGAGTCT CGTCGAACAA GCCGTCCTGC ATTTCGGTCG GCTGGATGTC
GCCTTCAATA ACGCCGGGAT TACAGGGCCG TCTGCGTACA TCGCGAACTA TCCAGGCGCC
GACTGGCGTC ACGTCATCAA CGTCAATCTC CTGGGCATCT TCAACAGCAT GCAGCCGCAG
CTGCGGCTGT TCGAGTCGCA GGGCGCGGGA GTCATTGTCA ACACGGCGTC GGTGATTGGT
TTGAGGGGCG TCGCGGGCGG AAGCGCCTAC GCGGCGGCGA AACATGGCGT CATCGGTTTG
ACGAAGTGCG CGGCCCTCGA ATACGGCCGC TCGGGGATCC GCATCAACGC TGTCTGTCCC
GGGTACATCG AGACGCCGCT GGTTGCCGCT GTTCCAGACC GGATACTCAC CGAAAAAATC
AACCGAACCG GCGCGCGACG ATTGGGCCGC CCGGATGAAG TCGCTGCGCT GGTGCTGTGG
CTCGCATCAC CTGCGGCCTC CTACGTGAAC GGCGCCGCCG TGGCCGTTGA CGGCGGGTTC
CTGGCGTCGT GA
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| Protein sequence | MTLVSAATEQ TRDCVTGGDA RVVLVTGGAS GIGRAAALAW ARQGCSVLVA DIDDRGGAET
VEAIERLGSR ARYQRNDVTD ERECASLVEQ AVLHFGRLDV AFNNAGITGP SAYIANYPGA
DWRHVINVNL LGIFNSMQPQ LRLFESQGAG VIVNTASVIG LRGVAGGSAY AAAKHGVIGL
TKCAALEYGR SGIRINAVCP GYIETPLVAA VPDRILTEKI NRTGARRLGR PDEVAALVLW
LASPAASYVN GAAVAVDGGF LAS
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