| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0228 |
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| Symbol | rpsO |
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| ID | 4020686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 265334 |
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| End bp | 265603 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637960407 |
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| Product | 30S ribosomal protein S15 |
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| Protein accession | YP_567369 |
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| Protein GI | 91974710 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0184] Ribosomal protein S15P/S13E |
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| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00134414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.416814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGATTA CCGCAGAACG CAAAGCGGAA GTCATCCAAG GTAATGCCAA CAAGGCCGGC
GATACCGGCT CGCCCGAGGT TCAGGTCGCG ATCCTGTCGG AACGCATCGT CAACCTCACC
GCGCATTTCA AAACCCACAC CAAGGACAAC CACTCGCGTC GCGGGCTGTT GAAGCTGGTG
TCGACGCGCC GTTCGCTGCT TGACTACGTC AAGAAGAAGG ACGAGGCGCG TTACAAGGCG
CTGCTCGAGA AGCACAACAT CCGTCGCTGA
|
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| Protein sequence | MSITAERKAE VIQGNANKAG DTGSPEVQVA ILSERIVNLT AHFKTHTKDN HSRRGLLKLV
STRRSLLDYV KKKDEARYKA LLEKHNIRR
|
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