| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0225 |
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| Symbol | |
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| ID | 4020683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 258512 |
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| End bp | 260194 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960404 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_567366 |
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| Protein GI | 91974707 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.311555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCCT TCCTTCGATC CGCCGCTCAC GACCACGCGA TGGCGATGCT CGATGCGATC
AACCGCTCGC AAGCCGTGAT CGAATTCGAT CTTGAAGGGA ATATTCGCTG CGCGAACGAC
AACTTTCTGG CGACGACCGG CTATTCGCTC GACGAGATCA AGGGCAAGCA TCACCGCATC
TTCGTCGATC CGGCCGAGCG CGACAGCGCC GCCTATCGCG ATTTCTGGGC GTCCCTGCGT
TCCGGCAAGC AGCAGTCAGG CGAGTTCGAG CGGGTCGCCA AGGGCGGCAG GCCGCTCTGG
CTTCAGGCGT CGTACAGCCC GATCGTCGAC AAGAGCGGCA AACCGGGCGG TTTCGTCAAA
TTCGCCGCCG ATGTCACCGC CGCGAAAAAC CGCAGCATGG AAGACGCCGG CAAGATCCTG
GCCATCAGCC GCGCCCAGGC CGTGATCGAA TTCGATCTCG ACGGCCATAT CATCACCGCC
AACGACAGAT TTCTCAAAGC GATGGGTTAC GAACTCACTG ACATCCAGGG CAAACACCAC
AGCATCTTCG TCGATCCGTC CGAGCGCGCC TCGTCGGAAT ACTGCAACTT CTGGGCGCGC
CTCGGCCGCG GCGAATACGT CTCGGGCGAA TTCAAGCGGT TCGGCAAGGG CCAGACCGAG
ATCTGGATTC TCGCCACCTA CAACCCCATT CTCGACGTCA AGGGAAAGCC GCTGAAGGTG
GTCAAGTTCG CCAGCGACAT CACCCAGCAG AAGCTGTCCG CCGCCGATAC GGCCGGACAG
ATCGCCGCGA TTGGCAAGTC GCAGGCCGTC ATCGAGTTCG ACACCCAGGG CATCATCCTC
GACGCCAACG ACAATTTTCT GGCCGCGGTC GGCTTCACGC TGCCGGAGAT CAAGGGCCGC
CATCACCGCA TTTTCGTCGA CCCCGCGGAG CGGGACGGCG TCGCCTATCA GGATTTCTGG
GCGGCGCTTG CGCGCGGCCA GTATCAGTCC GCGGAGTACA AGAGGATCGG CAAGGGCGGC
AAGGAAATCT GGATTCAGGC GTCCTACAAT CCGATCATCG GCCTCGACGG CAAACCCTAC
AAGATCGTCA AATACGCCAC CGACATTACC CGCCAGGTGC TGACCCGGAT CGGCAACGAG
CGCGTCCGCG GGATGATGGA ATCGGTCGCG GCAGGCGCCG AGGAATTGAA CGCGTCGGTG
CGCGAGATTT CCGAGGCGAT GACCAAATCG CGACAGACCA CGCTCGACGC CGTCAACGAG
GTCGATTCTG TCGACGGCCA AGCCAACCGG CTCAACGAAG CCGCCCAGGC GATGAGTGGG
ATCGTCGAAC TGATCAGCAA CATCACCGGG CAGATCAATC TGCTGGCGCT CAACGCCACC
ATCGAATCGG CCCGCGCCGG AGAAGCCGGC CGCGGCTTCG CGGTGGTCGC CGGCGAAGTG
AAGAATCTCG CCAATCAGGC CAAGCAGGCG ACCGACCGGA TCGGCGCGGA GATCGAGAAC
CTCAACGGCA TTTCCGGCGA TGTCGTCGGC GCGCTCGGCA AGATCAAGGC GGCGATTCAG
AACGTCAGCG AATACGTCAC CTCGACGGCC GCGGCGGTCG AGGAGCAGAG CACGGTGACC
GGCGAGATGT CGTCGGGGAT GCAGCGCGCC GCCACCGAGG CCGCGGCGAT CGCGGCGGCC
TGA
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| Protein sequence | MLSFLRSAAH DHAMAMLDAI NRSQAVIEFD LEGNIRCAND NFLATTGYSL DEIKGKHHRI
FVDPAERDSA AYRDFWASLR SGKQQSGEFE RVAKGGRPLW LQASYSPIVD KSGKPGGFVK
FAADVTAAKN RSMEDAGKIL AISRAQAVIE FDLDGHIITA NDRFLKAMGY ELTDIQGKHH
SIFVDPSERA SSEYCNFWAR LGRGEYVSGE FKRFGKGQTE IWILATYNPI LDVKGKPLKV
VKFASDITQQ KLSAADTAGQ IAAIGKSQAV IEFDTQGIIL DANDNFLAAV GFTLPEIKGR
HHRIFVDPAE RDGVAYQDFW AALARGQYQS AEYKRIGKGG KEIWIQASYN PIIGLDGKPY
KIVKYATDIT RQVLTRIGNE RVRGMMESVA AGAEELNASV REISEAMTKS RQTTLDAVNE
VDSVDGQANR LNEAAQAMSG IVELISNITG QINLLALNAT IESARAGEAG RGFAVVAGEV
KNLANQAKQA TDRIGAEIEN LNGISGDVVG ALGKIKAAIQ NVSEYVTSTA AAVEEQSTVT
GEMSSGMQRA ATEAAAIAAA
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