Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0212 |
Symbol | |
ID | 4020670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 242693 |
End bp | 243574 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637960391 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_567353 |
Protein GI | 91974694 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.156044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAC TGCCCGAAGT CGAAACCGTC CGCCTCGGCC TGACGCCCGC GATGGAAGGG TTCCGGATCG CGCGGGCGGT GACGAATCGG GACGATCTGC GGTTTCCGCT GCAGAAGGAT TTTGTCGCGC GGCTGACCGG ACAGATCGTC ACGGGGCTGG GGCGGCGCGC CAAATATCTG CTGGCCGACC TCGCTTCCGG CGACGTGCTG CTGATGCATC TCGGGATGTC CGGCTCGTTC CGGGTGGTCG CCGCCGACGG CGCGCACACG CCGGGCGAAT TTCACCATCC GCGCAGCGAG GACCGCACCC ATGATCATGT GGTGTTCGAC ATGTCGTCCG GCGCGCGGGT GATCTTCAAC GACCCGCGGC GGTTCGGCTT CATGAAGATC TTTCCGCGCG CCGCCATCGA CGACGAGCCG CATCTCAAGG GACTCGGCCC CGAGCCGCTC GGCAACGCCT TCGACGCCGT GATGCTGGCG CGCGCCTGCG CCGGCAAGCA GACCAGCCTG AAGGCGGCGC TGCTGGACCA GCGCGTCGTC GCCGGGCTCG GCAACATCTA TGTCTGCGAG GCGCTGTGGC GCGCGCATCT GTCCCCCAAG CGCAAGGCGG CGACGCTCGC CAACCGCAAG AACGAGCCGA CCGATCACGC GCTGCGGCTG ACCGACGCGA TCCGCGCCGT GCTCGGCGAC GCCATCAAGG CCGGCGGCTC GTCGCTGCGC GACCACCGCC AGACCTCCGG CGAACTCGGT TACTTCCAGC ATTCCTTCGC CGCCTACGAC CGCGAAGGCG AACGCTGCCG CACCGACGGC TGCGGCGGCG CCGTGAAGCG CTTCGTGCAG AACGGCCGCT CGACGTTCTG GTGTTCGGGG TGTCAGAAGT AG
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Protein sequence | MPELPEVETV RLGLTPAMEG FRIARAVTNR DDLRFPLQKD FVARLTGQIV TGLGRRAKYL LADLASGDVL LMHLGMSGSF RVVAADGAHT PGEFHHPRSE DRTHDHVVFD MSSGARVIFN DPRRFGFMKI FPRAAIDDEP HLKGLGPEPL GNAFDAVMLA RACAGKQTSL KAALLDQRVV AGLGNIYVCE ALWRAHLSPK RKAATLANRK NEPTDHALRL TDAIRAVLGD AIKAGGSSLR DHRQTSGELG YFQHSFAAYD REGERCRTDG CGGAVKRFVQ NGRSTFWCSG CQK
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