Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0134 |
Symbol | |
ID | 4020590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 153579 |
End bp | 154247 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960311 |
Product | beta-lactamase-like |
Protein accession | YP_567275 |
Protein GI | 91974616 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC AATCCGACAC CAAAACCAAA GCCGGCGCGG CGATCATTCC GGTCACGCCG TTTCAGCAGA ACTGCACATT GTTGTGGTGC GAGGCCACCC GCAAGGCGGT GGTGGTCGAT CCCGGCGGCG ACGTCCCGGA GATTCTGGCT GCGATCGAGA AGACCGGCGT CAGCGTCGAG AAAATCTGGC TGACCCACGG TCATATCGAT CACGTCGGCG GCGCCGCCGA ACTGCGCGAC GCTCTCGGGG TTCAGATCGA AGGTCCGCAT CGGGACGACC TTTTCCTGCT GGAAAACGTC GTCAATAGCG GCCGCAGCTT CGGCATCGGC GGCGTCCGCG ACGTCACCCC GGATCGCTGG CTCGACCACG GCGACAGCGT CAGCGTCGGC GAACTGACCT TCCAGATTTT GCACTGCCCC GGCCATTCGC CGGGCAGCGT GGTGTTCTTC AACGATGCGA TGCGGTTCGC CCTGGTGGGC GACGTGCTGT TCGCGGGCTC GGTCGGCCGA ACCGACCTGC CCGGCGGCAA CCATGCGACG CTGATCAGTT CGATCACCGA CAGGCTGCTG CCGCTCGGCG ACGACGTCGG CTTCATCTGC GGCCACGGCG CGGGCTCGAG CTTCGGTCAG GAACGCCTGA CCAATCCGTT CCTGAACGGC GCAATGTAA
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Protein sequence | MSTQSDTKTK AGAAIIPVTP FQQNCTLLWC EATRKAVVVD PGGDVPEILA AIEKTGVSVE KIWLTHGHID HVGGAAELRD ALGVQIEGPH RDDLFLLENV VNSGRSFGIG GVRDVTPDRW LDHGDSVSVG ELTFQILHCP GHSPGSVVFF NDAMRFALVG DVLFAGSVGR TDLPGGNHAT LISSITDRLL PLGDDVGFIC GHGAGSSFGQ ERLTNPFLNG AM
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