Gene RPD_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0108 
Symbol 
ID4020564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp122868 
End bp123170 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content66% 
IMG OID637960285 
Producthypothetical protein 
Protein accessionYP_567249 
Protein GI91974590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.953611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAGC CAGACGATAA ATCCGCCGAC TCCATCACCT ATGTCGACAT CCCGACCGCA 
CCGCACGTCT ATTTCGACAT CGCGCCGGCG CATGGCGTGA TGGCCAATGG CGTCGAGATC
GAGCTCGCCG CGCGGACGCT CAATCCGCTG GCGGACGGCA CCGTCGAGGT GAAATTTGTC
ACCACCGCGC GGCTGCGCTG CAGCCAGGCC GGCGCGCAGC ATCTGCGCAA CGCGCTCGAC
GCGGTGCTGA AGATGATCGA GGCCGCGCAG CAAAGCCCCG CTGCGGCGTC GAAGCTGAAC
TGA
 
Protein sequence
MSEPDDKSAD SITYVDIPTA PHVYFDIAPA HGVMANGVEI ELAARTLNPL ADGTVEVKFV 
TTARLRCSQA GAQHLRNALD AVLKMIEAAQ QSPAAASKLN