| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0098 |
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| Symbol | |
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| ID | 4020554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 112658 |
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| End bp | 114925 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960275 |
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| Product | PTSINtr with GAF domain, PtsP |
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| Protein accession | YP_567239 |
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| Protein GI | 91974580 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.529028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.250641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAGCA CGTCGGGCGG CCCCCGCGTC TTGCTGAGAC GGCTCCGTGA AACCATGGCG
GAGCAAGTCT CCGCGCAGGA ACGGCTGGAC AAGATCGTGG TGCTGATCGC CGCCAACATG
GTGGCGGAGG TGTGCTCGAC CTATGTGCTG CGGGTCGACA ACACGCTCGA ACTCTACGCC
ACCGAAGGCC TCAACCGCGA AGCCGTGCAC CAGACCGTGC TCAACGCGCA TGAAGGCCTG
GTCGGCCTGG TCGCCTCCGA GGCGACGCCG CTGAATCTCT CCGACGCCCA AAGCCACCCG
GCGTTCTCGT TCCGCCCGGA AACCGGCGAA GAAATCTATC ACTCCTTCCT CGGCGTGCCG
ATCCTGCGCG CCGGCAACAC GCTCGGCGTG CTGGTGGTGC AGAACCGCGC CAAGCGCACT
TATGTCGAAG AAGAAGTCGA GGCGCTGCAG ACCACCGCGA TGGTGCTCGC CGAGATGATC
GCCTCGGGCG AATTGTCCGC CCTGGCGCAG CCCGGCGCCG AACCGGCGGC GCGGCACTCG
ATCCACAAGA CCGGCGCGAT CCTGTCGGAC GGCATCGCGC TCGGCCATGT CGTGCTGCAC
GAGCCCCGCG TCGTCATCAC CAATTACATC GCCGAGGATC TCCCCAAGGA GATCAAGCGG
CTCGATGCCG CCTTGGCCAA GCTGCGCGCC GATCTCGACC GGTTGCTGGA GCGCGGCGAC
GTCGCCGACG GCGGCGAGCA TCGCGAGGTG CTGGAAGCCT ACCGGATGTT CGCCAACGAC
CATGGCTGGT CGCACCGGCT GCACGAGGCG GTGGCCACCG GCCTGACCGC GGAGGCGGCC
GTCGAGCGTG TGCAGTCCGA CACCCGCGCC CGGATGCTGC GCTCGACCGA CCCCTATCTG
CGCGACCGCC TGCACGATCT CGAAGATCTC GGCCACCGGC TGATGCGCCA GCTCGTCGGG
CAGAATCATG CGCCGTCCCG CGAGCAACTG CCCGACAACG CCATCCTGAT CGCGCGCTCG
ATGGGACCTG CGGCGCTGCT GGACTACGAC CGGACCCGGC TGCGAGGCCT GGTGCTCGAG
GAAGGCACCG CGAATTCGCA CGTGTCGATC GTGGCGCGCG CGCTCGGCAT CGCCGCGGTC
GGCGAGGTGC CGAACGCGCC AGGCATCGCC GATCCCGGCG ACGCGATCAT CGTGGATGCG
ACCTCCGGCT CGATCTATGT GCGGCCATCG GCGGAAGTCG AGGCCGCCTA TGGCGAGCGC
GTGCGCTTCC GCGCCCGCCG CCAGGCGCAG TATTCGGCGT TGCGCGATCT GGCCTGCGTC
ACCAAGGACG GCCAGCCGAT CGACCTGATG ATCAATGCCG GCCTCGCGAT CGACCTGCCG
CATATCGACG ACACCGGCTC GTCCGGCATC GGCCTGTTTC GCACCGAGCT GCAGTTCATG
ATCGGCCAGA GCCTGCCGCG CTCGAGCGAC CAGCTCGCGC TGTATCGCAC CGTGCTCGAC
GCCGCCGGCT CGAAACCGGT GACGTTCCGC ACGCTCGACA TCGGCGGCGA CAAGGCGCTG
CCTTATATGG AGACGGTGGT CGAGGAGAAT CCGGCGCTGG GCTGGCGCGC GATCCGGCTC
GGGCTCGACC GGCCGGGCCT GTTGCGCAGC CAGATTCGCG CGCTGCTGCG CGCCGGCGGC
GGCCGCTCCT TGCGCATCAT GTTCCCGATG ATTTCCGAGG TCGCGGAGTT CGACGCCGCT
AAGGCGATCG TCGAGCGCGA ATTGACCTAT CTGCGTCAGC ACGGCCACAC CTTGCCGGAG
CGCGTCGACG TCGGCACCAT GGTCGAGGTC CCGGCGCTGC TTTATCAGCT CGACGAGTTG
TTGAAGAAGG TCGACTTCAT CTCGGTCGGC TCCAACGATC TGTTCCAGTT CCTGTACGCG
GTCGATCGCG GCAATTCGAA AGTGTCGGAT CGCTTCGACA CGCTGTCGAC GCCGATCCTG
CGTGCGCTGC GCCACATCGT GCGCAAGGCG AAGGCCGCAA ACCGCTCGGT GTCGCTGTGC
GGCGAGATGG CGTCGCAGCC GCTGTCGGCG CTGGCGCTGA TCGCGATCGG CTACCGCGCG
CTGTCGGTGT CGGCGGTGTC GCACGGCCCG ATCAAGGCGA TGATCCTGGA GGTCGACGCC
GCCAAGGCCG AGGCGGCGAT CTTGCCGCTG CTCGACGCGC CCGCGGGCAG CGTCTCGATC
CGGCACAAGC TCGCGGAATT CGCCGAGGCT CACGGGCTCT CTTTGTAG
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| Protein sequence | MRSTSGGPRV LLRRLRETMA EQVSAQERLD KIVVLIAANM VAEVCSTYVL RVDNTLELYA
TEGLNREAVH QTVLNAHEGL VGLVASEATP LNLSDAQSHP AFSFRPETGE EIYHSFLGVP
ILRAGNTLGV LVVQNRAKRT YVEEEVEALQ TTAMVLAEMI ASGELSALAQ PGAEPAARHS
IHKTGAILSD GIALGHVVLH EPRVVITNYI AEDLPKEIKR LDAALAKLRA DLDRLLERGD
VADGGEHREV LEAYRMFAND HGWSHRLHEA VATGLTAEAA VERVQSDTRA RMLRSTDPYL
RDRLHDLEDL GHRLMRQLVG QNHAPSREQL PDNAILIARS MGPAALLDYD RTRLRGLVLE
EGTANSHVSI VARALGIAAV GEVPNAPGIA DPGDAIIVDA TSGSIYVRPS AEVEAAYGER
VRFRARRQAQ YSALRDLACV TKDGQPIDLM INAGLAIDLP HIDDTGSSGI GLFRTELQFM
IGQSLPRSSD QLALYRTVLD AAGSKPVTFR TLDIGGDKAL PYMETVVEEN PALGWRAIRL
GLDRPGLLRS QIRALLRAGG GRSLRIMFPM ISEVAEFDAA KAIVERELTY LRQHGHTLPE
RVDVGTMVEV PALLYQLDEL LKKVDFISVG SNDLFQFLYA VDRGNSKVSD RFDTLSTPIL
RALRHIVRKA KAANRSVSLC GEMASQPLSA LALIAIGYRA LSVSAVSHGP IKAMILEVDA
AKAEAAILPL LDAPAGSVSI RHKLAEFAEA HGLSL
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