Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0036 |
Symbol | |
ID | 4020490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 42301 |
End bp | 44961 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637960212 |
Product | hypothetical protein |
Protein accession | YP_567177 |
Protein GI | 91974518 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCAT CCCGCCGAAC GGTAGTCGTT CACACGGTGT TGGCCGGCCG CATGGAGCGG ACGGCGGCGG CGCGTTCGAA CGAACTCGGC GTGCAGATCG TGACGATGGG GCAGTTGGCG GCGCGGCTCG CGGGCGGGCT GCTGCGTCCG GTCGATTCGG AGGCGCTGCA GGAGGCGGTC TTTGCGGCCC TGCCGGTGGT CGACATGGGC GAACTGGAGC CAATCAAGCT GCTGCCCGGG ATGCCGGGCG CGGTGACAGC GACCTTCGAC AAGGCTTGGC GGGCCGGCGT CGACCTGTCG TCCGCGGCGC ATCCCCGGCT GGCGGCTTTG GCGGCGCTCG AGCAGGAGGT GGTGGGGCGT CTTCCTGCCT CGATGAAGCG GCCGGCTGAA TTGGTGGCGA TGGCGAAGGA GCGCATCGCC CAAGCGTCGA CGGTAATAGG CTCCCTTGAG ATCCACGGCC ACAGCGAGAT GTCGCCGTGC TGGCGTCCGC TGCTGGAGGC CCTGGCGAAC GTCGTCCCGT TGACCTGGGT GGCCGGCCCC CGGCACGTCC CGGCCTGGCT GGAGGGTACG GGCGTTACGG TCGCGAAGAC CGATCCGACG GCGACGGCGA CGGCCTCCTA TTCCTGCGCG AACCAGCAGC ACGAGGTGAT CGAGGCTTTC CGTTGGGTGC GGAAGCTGCT GGCGGAGGGT GTCCAGGCCG CCGACATCGC GATCGCGGCG ACCGGTCCCG CCGACTACGA CGACCACATG TTCGCGCAGG TGCAGGAGAG TAACCTGCCC GTTCATTTCG TGTCGGGCGT GAAGGCGCTG ACGACCGCCG ACGGCCAGGC GGCCGCCGCG CTGGCGGAGG TTTTGGCGAA AGGCCTGTCC CAGGAGCGCG TCCGGAGGCT GTTCGCACTG CTTCGCGGGT CGCCAGCGCT GGAGCGCATC CCGAGGGAAT GGACGCGGCT GCTGCCCCTT GGCGCGCCGC TCACCGAGAT GGAGCGGTGG GAGCGGGTGT TCGCCCGTGT GGAGGCTTCG GACTGGCCGG AGGGCCAGGA CCTGTCGGCG CTAGTGCTGG AGGTGCTGCG ACTGCTGGAT CGCGGTCTGG CGGCGGCCAC CGACGTCGGC GAGGCGCTGC TGACGGGCGT GCCGCTGTCG CTGTGGCGCC GGTCGCTGCG GGAGGGGCCG CCGGCGGCGC TGCCGGTCAC ACTGGGCCGC CTGCGGACCC CGGACGCGTT GGAGCCGGCC GCGAGCGTCA TCTGGTGCTC GGCCATCGAT CTGGCGTCGT CACCACGTCC GCATGTCTGG CTACTCGGGA TGAACGCAGG GCGGTGGCCA CGGCGGATCT CCGAGGACCG CCTGATCCCT AACCACGTGC TGCCGATCGA GGAGTTGGAC CCGCTGCCGA TCGCGGACGG CGACAAGCGG GATTTCGGAA CGATCCTGGC GACGGCGACG GAGGTTGCGA TGTCGCACAG CCGCCGCGAC GCCGGCGGGC GGCTGCGGGG GCGATCGCCC CTGATCAAGT CCTTCGCTGT GACCTACCTG GATCGCGGCC GGACGCCTGA GCACGCCGCG AGCGAGGCGG ACCGACTGCT GGCCTGTCCC GCCGAATTCG CGAAGCTGCC GGTCGCGGTG TCCGGGATCG GTTGCTGGCG CGACTGGTTC AGCGGCGGCC TCACCGCCCA CGACGGCCTG GTGGCGGCGA ACCACCCGCG GATCACGAAG CTGTTCGAGC GGTCGCTGTC GGCTACCTCG CTAAAGCTGT TGCTGCGGGA TCCGATCCGG TTCGTGTGGC GGTACGGGTT CAGGTGGACG GCGCCCGAGG ACGCCGACGA GCCGCTGACG CTGGACGGCC TCGCCTTCGG CAACTTAGTG CACGCGGTGC TGCAGAACGC GGTCGACGGC CTCTCCGAGG CCGGCGGTCT GGCCGCTGCC GATCGGGCCG CGATCGACGC CCGGATCGCC GCCGCCATCG GTGGGACCGT GGCGGCGTGG GAGGCCGAAT TCCCGGTGCC ACCGGCGGTG ATCTGGCGCA GCGCGGTGGA GCGCGCGTCG ACGACGGCGA CGGCGGCGCT AACCTATCCG ATGGCCGCAT TGCCCGACCA GCGGAGCTGG ACGGAGATTC CGTTCGGGAA GCCGGACGAG GCCGAGGGTG AGCGCGACCT GCCGTGGCCG ACCGAGAAGA CGGTCGAGAT CCCGGGCACC GGGCTGCTGA TCGACGGCAA GATCGACCGT TTGGATCTTG CCGGCGACCG GTCGAAGGCG CGGGTGCTGG ACTACAAGAC CGGCAAGCTC GACCGGAAGA TGGCCGAGAA AGTGATCGAC GGCGGCCGCG AACTGCAGCG CTGCCTGTAC GCCTTCGCGG TGAGGACGCT GGTCGAGGCC GGCGTCGGCG TCGAGGCCGC GCTGTTCTAC CCGAACGCTC CCGAGGGCGA GCAGGCTGTG TTTCCGCTGA CCGACGCAGC CCTGGAGGCG GCACTGGCGA AGGTGACGCA GGCGGTCTCG CTGTCGCGCG ACGCGCTGCT GGCCGGCGCC GCCGTGCCGG GTGAGGACGC CGCCGACAAG TACAACGACC TTAGGTTCGC GCTCCCGGCC AATGCCGGGT ATCTGCCGCG CAAAAAGTTG CCCGCCATCG ACCGGCTGGG ACAGGCGGCC GCCGTCTGGA GCGAGACATG A
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Protein sequence | MRASRRTVVV HTVLAGRMER TAAARSNELG VQIVTMGQLA ARLAGGLLRP VDSEALQEAV FAALPVVDMG ELEPIKLLPG MPGAVTATFD KAWRAGVDLS SAAHPRLAAL AALEQEVVGR LPASMKRPAE LVAMAKERIA QASTVIGSLE IHGHSEMSPC WRPLLEALAN VVPLTWVAGP RHVPAWLEGT GVTVAKTDPT ATATASYSCA NQQHEVIEAF RWVRKLLAEG VQAADIAIAA TGPADYDDHM FAQVQESNLP VHFVSGVKAL TTADGQAAAA LAEVLAKGLS QERVRRLFAL LRGSPALERI PREWTRLLPL GAPLTEMERW ERVFARVEAS DWPEGQDLSA LVLEVLRLLD RGLAAATDVG EALLTGVPLS LWRRSLREGP PAALPVTLGR LRTPDALEPA ASVIWCSAID LASSPRPHVW LLGMNAGRWP RRISEDRLIP NHVLPIEELD PLPIADGDKR DFGTILATAT EVAMSHSRRD AGGRLRGRSP LIKSFAVTYL DRGRTPEHAA SEADRLLACP AEFAKLPVAV SGIGCWRDWF SGGLTAHDGL VAANHPRITK LFERSLSATS LKLLLRDPIR FVWRYGFRWT APEDADEPLT LDGLAFGNLV HAVLQNAVDG LSEAGGLAAA DRAAIDARIA AAIGGTVAAW EAEFPVPPAV IWRSAVERAS TTATAALTYP MAALPDQRSW TEIPFGKPDE AEGERDLPWP TEKTVEIPGT GLLIDGKIDR LDLAGDRSKA RVLDYKTGKL DRKMAEKVID GGRELQRCLY AFAVRTLVEA GVGVEAALFY PNAPEGEQAV FPLTDAALEA ALAKVTQAVS LSRDALLAGA AVPGEDAADK YNDLRFALPA NAGYLPRKKL PAIDRLGQAA AVWSET
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