Gene RPD_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0033 
Symbol 
ID4020487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp39653 
End bp40090 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID637960209 
Producthypothetical protein 
Protein accessionYP_567174 
Protein GI91974515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.345056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGAGG CGCTCTCCAA GGCGACATTC GATCGCGACA TCGGACGGAT CGATCCTCGG 
TCCGTCCGGA TGTACGACTG GGCGATCGTC CAGGCGAACT ATCCCGTCTT CGACGTCATC
TTCAACCACG CCCAGGTCGC GCCGCTGCGG CTGCGATTGG TGTGCGACGA TTGGGACGAG
ATCCCGCCGT CCATCGAGTT GCTGAACAAG GAGGGACAGC CCCTCGCTAC GGCGCCACCG
AACGTGGGCA ACGTATTCAA CGGCAGCACG CACCCCAACA CCGGGCGGCC GTTCGTCTGC
ATGCGCGGCG CGCGTGAGTA CCACACCCAC GGAAGTCACA CGTCTGACCT GTGGGACAAC
TACCGCGGAC AATCCGGCAT GGATCTGGGC GGGATCGTGG TTCAGCTTTG GCGAGCTTGG
AAGAGGAGCG TCGGATGA
 
Protein sequence
MLEALSKATF DRDIGRIDPR SVRMYDWAIV QANYPVFDVI FNHAQVAPLR LRLVCDDWDE 
IPPSIELLNK EGQPLATAPP NVGNVFNGST HPNTGRPFVC MRGAREYHTH GSHTSDLWDN
YRGQSGMDLG GIVVQLWRAW KRSVG