Gene RPD_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0024 
Symbol 
ID4020478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp29308 
End bp29997 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID637960200 
Producthypothetical protein 
Protein accessionYP_567165 
Protein GI91974506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTTA GGAACAAGGC AGCCAAAATC ACGCGCTCGG ACGCGACCCG CAGGGTCGTC 
ACTTATCGAA GCGGACATTT CACCGGCTAC GTCGCCTCAC GGAAGAGCAG CACCGTCGTC
CAGTATGAAA GCATCCTGGA GCGGGACTTC ATCTATTTGT TGGAGACCGA CCGCGACGTG
TTGTGGTTTT CCGAGCAGCC GGCGCCGCTA AAATTTTCGG ACGGCATCGC GCACCATACA
TGGACGCTTG ATTTCGAGAT TGAGCGGTCG TCTGGCCGGT ACCTCGTTGA GGTCAAGCCA
CTTTCCAAGG TGAAGAAGTA TCGGCTTGAC GTAATTTACG GCTTTGCGAG GGCGGCGGCT
AAGGCCTCGG GATACCAGAA CCTGGAGTTG TGGACCGACC GCGAACTGAA GGCTCTTCCT
CGTTTGCCTA ACGCCGAGAT TCTTGTCGGC AGCGACACGA CGTATCATGA CCCGGCATAT
GATCTGGCGC TCTTATCCAC CATCGCCGAG ATCGCGAAGG TTTCTGAGCG AACAACGGTG
CGCGAGTTGC GCTCGCTGTC GCGACTAGGA CCGCTGTCGT ATCGGGCTGT GATGCGACAG
ATCGCGATCG GAGGCCTGAT CCCGGCGGAC TCTACGGTGT TTCTAGGCGA CGACGCCATC
CTTCTCATCC CGGGTGGAGG AGGTTTCTGA
 
Protein sequence
MVVRNKAAKI TRSDATRRVV TYRSGHFTGY VASRKSSTVV QYESILERDF IYLLETDRDV 
LWFSEQPAPL KFSDGIAHHT WTLDFEIERS SGRYLVEVKP LSKVKKYRLD VIYGFARAAA
KASGYQNLEL WTDRELKALP RLPNAEILVG SDTTYHDPAY DLALLSTIAE IAKVSERTTV
RELRSLSRLG PLSYRAVMRQ IAIGGLIPAD STVFLGDDAI LLIPGGGGF