Gene RPD_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0005 
Symbol 
ID4020459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp7691 
End bp8461 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content61% 
IMG OID637960181 
Producthypothetical protein 
Protein accessionYP_567146 
Protein GI91974487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAGTC CTGGCAAACA GATTCATGGA GGGGCCATGG AAAGTGATCG TCTATGGGCG 
GCGGCGTCCA GATTGGCGGA CTATGTCAAA AGCCCTTCGC TGCGGCACAT TCGAGATCCG
CAGAACATTC AGAAGCTGGC GCGGGAAATT CTTCAGGCAG TCGATCAGGC TGGCTCGGTT
TGGAGCAAGT GGACCGCGGC TCGGGAGGAC ATCGTAAAGG CCGCGGCCAA CTGCTGGGTA
CCACCCGAAG ATCTCCGCGC GTTCTTGAAC AGTCTGCCTG GCCCCGCCCT AACCGCAACC
GACGTGGCGC AGCGTCTTCG CGCAATTTGG GAAGAACCAT GGACGTCGTA TCCGAAGGAA
GAACTCCAGG CCGGATGCCG AGCGCTCTAC GACGCCGAAA AGGCGGCGGG GACCGAAATG
CGGGCGATTA TCGGTGCTCT CGAAGAATTC CTTGAGGTCG AAGAGGAGCG GCTGCGACAG
GAGCAGAACG AGGCCTACCA GCAATTCCGC GAGCAGGACC GCATTCGTCG GCAGCAGCGA
TTCTTGTCCG GCGCCGATTG CGGTTGGACG CCGATCGATG GGTCGAAGGA GCTCTTTTGC
CGCCGCAATG GCAGGGCCTT CAGGGTTGGC CAGGCGAAAG ACAAGCGTTG GAAACTGTAT
CGGATAGCGG CCGTCGATGA CGCCGGCGAG CTGCTGGGGA CGTACGCCGG CCGGCGAGAG
GCCAGCAAGG CCCTAGAGCA GATCGCATAC CAGGCAGAAA TCCTCCGCTG A
 
Protein sequence
MDSPGKQIHG GAMESDRLWA AASRLADYVK SPSLRHIRDP QNIQKLAREI LQAVDQAGSV 
WSKWTAARED IVKAAANCWV PPEDLRAFLN SLPGPALTAT DVAQRLRAIW EEPWTSYPKE
ELQAGCRALY DAEKAAGTEM RAIIGALEEF LEVEEERLRQ EQNEAYQQFR EQDRIRRQQR
FLSGADCGWT PIDGSKELFC RRNGRAFRVG QAKDKRWKLY RIAAVDDAGE LLGTYAGRRE
ASKALEQIAY QAEILR