| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4878 |
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| Symbol | |
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| ID | 3973680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5446719 |
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| End bp | 5447600 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637927990 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_534719 |
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| Protein GI | 90426349 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAG CAATCAAGAA AGTCGGCGTG ATCGGCTCCG GCCAGATGGG CAACGGGATC
GCCCATGTCG CGGCGTTGGG CGGCTTCGAC GTGGTGTTGA ACGACATCGC CGCCGACCGC
ACCAAATCGG CGATGGCCAC CATCAACGGC AATTTGTCGC GCCAGGTCGC CAAGAAGATC
ATCACCGAGG AGGCCCGCAA GCAGGCTTTG ACGCGGATCA CCGGTGCCGA CCGGCTCGAC
GGCCTCGCCG ATTGCGACCT GGTGATCGAG ACCGCGGTCG AAAAAGAAGA GGTCAAGCGC
AAGATCTTCC ACGATCTGTG CGCGGTGCTG AAGCCCGAGG CGATCGTCGC CTCCAACACC
TCGTCGATTT CGATCACAAG GCTCGCCGCC TCCACCGACC GCCCGGAGCG CTTCATCGGC
ATTCACTTCA TGAATCCGGT GCCGCTGATG GAATTGGTCG AGCTGATCCG CGGCATCGCC
ACCGACGACG CGACGTTCGA CGCCGCCAAG GCGTTCGTCA CCAAGCTCGG CAAGCAGATC
GCAGTGTCGG AGGATTTCCC GGCCTTCATC GTCAACCGCA TCCTGCTGCC GATGATCAAC
GAGGCGATCT ACACGCTGTA TGAGGGCGTC GGCAATGTCG AGGCGATCGA CGCCGCGATG
AAACTCGGCG CCCACCACCC GATGGGGCCG CTCGAACTCG CCGATTTCAT CGGGCTCGAC
ACCTGCCTGT CGATCATGCA GGTGCTGCAC GAGGGGCTCG CCGACTCGAA ATATCGGCCG
TGCCCGCTGC TGGTGAAATA CGTCGAGGCC GGCTGGCTCG GCCGCAAGAC CAGCCGCGGC
TTCTACGACT ATCGCGGCGA CAAGCCGGTG CCGACGCGCT GA
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| Protein sequence | MALAIKKVGV IGSGQMGNGI AHVAALGGFD VVLNDIAADR TKSAMATING NLSRQVAKKI
ITEEARKQAL TRITGADRLD GLADCDLVIE TAVEKEEVKR KIFHDLCAVL KPEAIVASNT
SSISITRLAA STDRPERFIG IHFMNPVPLM ELVELIRGIA TDDATFDAAK AFVTKLGKQI
AVSEDFPAFI VNRILLPMIN EAIYTLYEGV GNVEAIDAAM KLGAHHPMGP LELADFIGLD
TCLSIMQVLH EGLADSKYRP CPLLVKYVEA GWLGRKTSRG FYDYRGDKPV PTR
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