| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4844 |
|---|
| Symbol | |
|---|
| ID | 3973548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5406424 |
|---|
| End bp | 5406867 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637927956 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_534685 |
|---|
| Protein GI | 90426315 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTT TGTTGGTGTC GCTGGGCAGC TGGAATTGGC TGATCGTCGG CTTCGTGCTG
ATGGGGCTCG AGCTCATGGC GCCCGGAGTG TTTCTGTTCT GGCTCGGGCT CGCGGCGTTG
TTGGTCGGCG GGCTGTCGTT CGTCACCGAG CCGTCCTGGC AGGCGCAGAT CCTGGCCTTT
GCGCTGTTTT CGATCTCCGC GGTGCCGTTG TGGCGGCGCT TCGCGCGGCC GCGACCCGGC
GAAGGCAGCA ATCCGTTTCT CAACAAGCGC GCCGAAGCGC TGGTCGGCCG GGTGTTGACG
CTGGAGAAGC CGATCGTCGA CGGCGCCGGC ACGCTGCGGA TCGACGACAC CGTGTGGCGG
GTGTCCGGCC CCGACGCGCC GGCCGGCAGC AAGGTGAAGA TCGTCGAGGC CGACGGCGCC
AGCCTGACCG TGGCGGGAGC TTAA
|
|---|
| Protein sequence | MTGLLVSLGS WNWLIVGFVL MGLELMAPGV FLFWLGLAAL LVGGLSFVTE PSWQAQILAF
ALFSISAVPL WRRFARPRPG EGSNPFLNKR AEALVGRVLT LEKPIVDGAG TLRIDDTVWR
VSGPDAPAGS KVKIVEADGA SLTVAGA
|
|---|
| |