Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4830 |
Symbol | |
ID | 3973534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5390720 |
End bp | 5391604 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927942 |
Product | periplasmic solute binding protein |
Protein accession | YP_534671 |
Protein GI | 90426301 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGCT TTTGGCAAAC CGCGAGTCTC GTCTTCACCG CCCTCACCGC GGCAATCCCC GCCGCTCATG CCCAGGACCG CATCGACGTG GTCGCCAGCT TCTCGATCCT GGCGGATTTC GTCCGCAACG TCGGCGGCGA TCGGGTTCAG GTCGCCACCC TAGTGGGCCC CGGCGGCGAC GCTCATGTTT ATACGCCGAC GCCCGCGGAT GCGAAGAAGA TCACCGCCGC CAAGCTGGTG ATCATCAACG GCCTCGGCTT CGAGGGCTGG CTGCCGCGCC TGGTGAAATC GTCGGGCGGC AAGGCGCAGG TCGCCACCGC CACCACTGGC ATCACACCGC GCAAGCTCGA AGGCCACGCC GATCCGCACG CCTGGCAGTC GGTCCCGAAT GCTAAGATCT ACGTCGCCAA CATCCGCGAC GCCTTGAGCG GCGCCGATCC CGCCGGCGCC GACACCTACC GCGCCAACGC CGAGAGCTAT CTCGCCAAAC TCGACGCGCT GGACGGCGAG ATTCGCGCCG CGGTGGCGAA AATCCCGAGC GAGCGGCGCA AGGTGATCTC CACCCACGAC GCCTTCGGCT ACTTCGCCGA GGCCTATGGC ATCGCCTTCA TCGCCCCGCA GGGGGTCTCC ACCGAATCCG AGATCAGCGC CAAGGACATC GCCCGCATCA TCAAACAGGT GAAGGCGGAA AAGCTGCCGG CGGTGTTCCT GGAGAGCATC AGCGACCCGC GGCTGATGCG CCGGATCGCA GCCGAGACCG GCGCCAAGGT CGGCGGCTCG CTGTATTCCG ACAGTCTGAC CGACGAAAAG GGCGAGGCCC CCACTTACAT TGATATGGTC AGGTACAATA TAAAGACGCT GACGAGCGCG CTGACCACCG AGTAA
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Protein sequence | MRRFWQTASL VFTALTAAIP AAHAQDRIDV VASFSILADF VRNVGGDRVQ VATLVGPGGD AHVYTPTPAD AKKITAAKLV IINGLGFEGW LPRLVKSSGG KAQVATATTG ITPRKLEGHA DPHAWQSVPN AKIYVANIRD ALSGADPAGA DTYRANAESY LAKLDALDGE IRAAVAKIPS ERRKVISTHD AFGYFAEAYG IAFIAPQGVS TESEISAKDI ARIIKQVKAE KLPAVFLESI SDPRLMRRIA AETGAKVGGS LYSDSLTDEK GEAPTYIDMV RYNIKTLTSA LTTE
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