Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4799 |
Symbol | |
ID | 3973503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5359495 |
End bp | 5359941 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927911 |
Product | 4-hydroxybenzoyl-CoA thioesterase |
Protein accession | YP_534640 |
Protein GI | 90426270 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family [TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.974363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGAATT CTCTCGACGG CGCGATCGGC GACGGGCTGC ATCGCATGCA GGTTCGCGTC TATTACGAAG ACACCGATTT TTCCGGCATC GTCTACCACG CCAACTATCT GCGCTTCATG GAGCGCGGGC GGACCAACTA TCTGCGGCTG CTCGGCGCCG AGCAGAGTGC GCTGTTCGCC GAAGCGCAGG ATGAGGCGCC GGGCTTCGCC TTCGTGGTGC GGGCGATGCA GCTGGATTTT CTCAAGCCGG CGAAGATGGA CGACGTGCTG GAGATCGTGA CGCGGCCGCT CGAGGTGCGC GGCGCCTCGA TCACCATGCA TCAACAGGTC AAGCGTGGCG ACGCGGTGCT GATCGAAGCC AAGGTCAAGG TCGCCTTCGT TGCGCAGGGC CGGGCGCGGC CGATCCCGAA GCCGCTGCGC GTGGCGATGG CGGCCGATCT CGGCTGA
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Protein sequence | MTNSLDGAIG DGLHRMQVRV YYEDTDFSGI VYHANYLRFM ERGRTNYLRL LGAEQSALFA EAQDEAPGFA FVVRAMQLDF LKPAKMDDVL EIVTRPLEVR GASITMHQQV KRGDAVLIEA KVKVAFVAQG RARPIPKPLR VAMAADLG
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