Gene RPC_4799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4799 
Symbol 
ID3973503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5359495 
End bp5359941 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content65% 
IMG OID637927911 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_534640 
Protein GI90426270 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.974363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAATT CTCTCGACGG CGCGATCGGC GACGGGCTGC ATCGCATGCA GGTTCGCGTC 
TATTACGAAG ACACCGATTT TTCCGGCATC GTCTACCACG CCAACTATCT GCGCTTCATG
GAGCGCGGGC GGACCAACTA TCTGCGGCTG CTCGGCGCCG AGCAGAGTGC GCTGTTCGCC
GAAGCGCAGG ATGAGGCGCC GGGCTTCGCC TTCGTGGTGC GGGCGATGCA GCTGGATTTT
CTCAAGCCGG CGAAGATGGA CGACGTGCTG GAGATCGTGA CGCGGCCGCT CGAGGTGCGC
GGCGCCTCGA TCACCATGCA TCAACAGGTC AAGCGTGGCG ACGCGGTGCT GATCGAAGCC
AAGGTCAAGG TCGCCTTCGT TGCGCAGGGC CGGGCGCGGC CGATCCCGAA GCCGCTGCGC
GTGGCGATGG CGGCCGATCT CGGCTGA
 
Protein sequence
MTNSLDGAIG DGLHRMQVRV YYEDTDFSGI VYHANYLRFM ERGRTNYLRL LGAEQSALFA 
EAQDEAPGFA FVVRAMQLDF LKPAKMDDVL EIVTRPLEVR GASITMHQQV KRGDAVLIEA
KVKVAFVAQG RARPIPKPLR VAMAADLG