Gene RPC_4739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4739 
Symbol 
ID3972715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5303915 
End bp5304655 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID637927851 
ProductAzlC-like 
Protein accessionYP_534580 
Protein GI90426210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.750725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC ATATTCCAAA AGCCCCAGCC TATTGGGCGC GCGACGGCAT TTTGCCCGGC 
GTGATCGCGA TCGGGCCGCT GCTGCCCGGG ACGCTGGCCT TCGGCATGGC GTTCGGCGCC
TTGTGCGCGC AGAAGCATTT CACCTTGGCC GAGGTCGAGG TGATGATGAT CAGCGTCTAT
GGCGGGCTGT CGCAATTCGT CGCGGTGCAG GCCTGGCCGG ACCGGCTGAC GCCGTCGTCG
ATCGCCGCCT TGGCGCTGCT CACCACCACA GTCAACATCC GCTTCGTGCT GATGACGGCC
ACGATGCAGC CGTGGTTCGG CAATCTGCCG CCGTGGCAGG CTTATTCCTC GATGCTGCTG
GTCACCGATG GCGGCTGGCT CGCCGCGATG CGCTACCGCG AGCACGGCGG CGCCAATGCC
TGGTTCTATG TCGGCGGCGG CCTGGTGCTG TACGCGCTGT GGGTGGTGGC GGCGATCCCG
GGATTCCTGC TCGCCGAACA GCTTGCCGAT CCGAAGAAAT ACGGCGTCGA CCTGGTGATG
CCGGCGTTCT TCGCCGCCAT GCTGGTACCG GCCTGGAAGG GGCCGCGGAA GGCGCTGCCT
TGGGCGGTCT CCGGCGCCGT CGCGGTGGCG GTGCACGCGC TGGTACCCGG CTGGTGGTTC
ATCATCGCCG GCGCATTGTC GGGCGCGATC AGCGCCGGGC TGATGGACGA TCCGCCGCCG
CGCCACGGAC ATCCGGCATG A
 
Protein sequence
MTSHIPKAPA YWARDGILPG VIAIGPLLPG TLAFGMAFGA LCAQKHFTLA EVEVMMISVY 
GGLSQFVAVQ AWPDRLTPSS IAALALLTTT VNIRFVLMTA TMQPWFGNLP PWQAYSSMLL
VTDGGWLAAM RYREHGGANA WFYVGGGLVL YALWVVAAIP GFLLAEQLAD PKKYGVDLVM
PAFFAAMLVP AWKGPRKALP WAVSGAVAVA VHALVPGWWF IIAGALSGAI SAGLMDDPPP
RHGHPA