| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4686 |
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| Symbol | |
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| ID | 3972392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5245322 |
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| End bp | 5246191 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637927798 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_534527 |
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| Protein GI | 90426157 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.452049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG GGCTGTTTCG AATTTCCCGC CGTTCGATGA CCACCGCCGC CGCTCTGGTC
GGTCTGGTGT CGTTGGGGCT GGGCGCCCAT GCCGCGCTGA ACAAGCGCGC GCTCGATGTG
CCGCCGCCGC CGGCGGCCGA CCAACCGGCC GATGCCAAGG GCAACGCTTC GCGGCTCGCG
CTGGTGATCG GCAACGGCCA TTATCCGGAC GCCGGCGCAC CATTGGCGCA GCCGATCAAT
GATGCGCGCG CGCTGACCGC CGCGCTGCGC CGCGACGGCT TCGATGTCGA CGTGGTGGAA
GACGCTACGC GCAACGACAT GGACCGCGCG ATCGCGCGGC TGAAGGCGCG GATCACGCCG
GAGTCGGTGG TGATGCTGTA TTTCGGCGGC TTCGCCATTC AGGCCGGCCG CGAGAGCTAC
ATGGTCCCGG TCGACGCCAC GATCTGGAAG GAGGCCGACG TGCGCCGCAA CGGCGTCAGC
GTCGAATCCG TGCTGACGGC GATGCAAGCG CAGGGCGCCC GCGCCAAGCT TGCGGTGATC
GATGCGTCGC GACGTAATCC CTATGAGCGC CGCTTTCGCG GTTACTCGCA CGGCTTGGCG
CCGATCGATG TGCCGGACAA TGCGCTGGTG CTGTCGGCGG CGACGCCCGG CAAGGTCGCC
GACGATTCTA ACGCCGCGAA CAGCGTGCTG ATGGCCGAGT TGCTCACCGC GCTGGCCTCG
CCGGTCGCCG CCGAAGCCGC CTTCCTCACC ACCAAGACCG CGGTGGTGCG CGCCTCCGAG
GGCACGCAGG TGCCGGCGCT GTCGTCGTCG CTGCACAGCG ACGTCGCGTT CGGCCGCGTC
GGGGCGTCTG CCGAAAAGCC CGGCGAATAG
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| Protein sequence | MNFGLFRISR RSMTTAAALV GLVSLGLGAH AALNKRALDV PPPPAADQPA DAKGNASRLA
LVIGNGHYPD AGAPLAQPIN DARALTAALR RDGFDVDVVE DATRNDMDRA IARLKARITP
ESVVMLYFGG FAIQAGRESY MVPVDATIWK EADVRRNGVS VESVLTAMQA QGARAKLAVI
DASRRNPYER RFRGYSHGLA PIDVPDNALV LSAATPGKVA DDSNAANSVL MAELLTALAS
PVAAEAAFLT TKTAVVRASE GTQVPALSSS LHSDVAFGRV GASAEKPGE
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