| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4665 |
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| Symbol | |
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| ID | 3972351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5219604 |
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| End bp | 5220674 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927777 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_534506 |
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| Protein GI | 90426136 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.157794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA CTTGGAATCG CTGGCTGATC GCCGCGCTGG TGGTGGCCGC CGCCGGCGGC
GGTTATTTCG CTTGGAAGGT TTTGGGAAAG AGTGATCTGC CGCCGGGGAT CGCCAGCGGC
AACGGTCGCA TCGAGGCCAC CGAGATCGAT ATCTCGACCA AGTCGCCCGG GCGCATCCGG
GAGATCCTCG TCGCCGAGGG CGATTACGTC ACCGCCGGTC AGGTGCTGGC GCGGATGGAC
ACCGACCAGC TGGAAGCGCA ACGCCGCCAA GCCACCGCGC AACTGCGCCG AGCCGCGATC
GGCGTCGACA CCGCGAAGAG CCTCGTCACC CAGCGCGAGG CCGAGCGCAC CGCGGCGGTC
GCGGTGATCG CGCAGCGCGA GGCGCAGCTC GATGCGCTGG AGCGCAAGCT GGCGCGCGCC
GAGACCTTGA TCAAGACCAG CGCGGTGTCG CAGCAGGTGC TCGACGACGA TCGCGCCAAC
GAGCAGGGCG CCAAAGCCGC GGTCGCCGCG GCGCAGGCGC AACTCGCCGC CACCGAGGCG
GCGATCAGCG CCGCCAAGGC GCAGGTGATC GATGCCGGCG CGGCGGTCGA CGCCGCGCAG
GCCGCGATCG AGAGCATCAG CGTCGAGATC AACGACAGTA CCTTGAAATC GCCGCGCGAC
GGCCGCGTGC AATATCGCGT GGCGCAGCCC GGCGAAGTGA TCGCCGCCGG CGGCCGGGTG
CTCAACCTTG TCGATCTCGG CGATGTCTAC ATGACCTTCT TCCTGCCGAC CGCGCAGGCC
GGACAGATTG CGATCGGCAG CGATGTGCGG CTCGTGCTCG ACGCCGTGCC GCAATACGTC
ATTCCGGCGA AGGCCACCTT CGTCGCCGAC GTCGCGCAGT TCACGCCGAA GACGGTGGAG
ACCGAGGAAG AGCGGCAGAA GCTGATGTTC CGGGTGAAAG CGCATATTCC GCCGGAGCTG
CTGCGCAAAT ACATCCAGCG GGTCAAGACC GGGCTGCCCG GCATGGCCTA CATCCGGCTC
GATCCGAAGG CCGAATGGCC GGCGCGGCTC AACGGAACGC TGGTGCAATG A
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| Protein sequence | MTQTWNRWLI AALVVAAAGG GYFAWKVLGK SDLPPGIASG NGRIEATEID ISTKSPGRIR
EILVAEGDYV TAGQVLARMD TDQLEAQRRQ ATAQLRRAAI GVDTAKSLVT QREAERTAAV
AVIAQREAQL DALERKLARA ETLIKTSAVS QQVLDDDRAN EQGAKAAVAA AQAQLAATEA
AISAAKAQVI DAGAAVDAAQ AAIESISVEI NDSTLKSPRD GRVQYRVAQP GEVIAAGGRV
LNLVDLGDVY MTFFLPTAQA GQIAIGSDVR LVLDAVPQYV IPAKATFVAD VAQFTPKTVE
TEEERQKLMF RVKAHIPPEL LRKYIQRVKT GLPGMAYIRL DPKAEWPARL NGTLVQ
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