Gene RPC_4647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4647 
Symbol 
ID3972236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5198251 
End bp5198727 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID637927759 
Productformate dehydrogenase subunit gamma 
Protein accessionYP_534488 
Protein GI90426118 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGG CCTATGAAGC ATGGGATTCC GAGCGCGCGG CGGAAATCAT CGCCGAACTG 
AAGAGCCACG AGGGCGCCAC GCTGGTGATC CTGCACGCGT TGCAGGAGGC GTTCGGCTAC
GTGCCGCAGG ACGCGATCCC GATGATCGCA TTGGCGCTCA ACCTGTCGCG CGCCGAAGTC
CATGGCGTGT TCACCTTCTA CCACGATTTC CGCAAAGTCC CGGCCGGCCG CCACGTGCTG
AAGCTGTGCT TGGCCGAAGC CTGCCAGTCG GCCGGCGGCG ATGCGTTGGC GGCGCGGGCG
GAGACGACGC TCGGCATGGC GGTGGGCGAG ACCCGTGGCG ACGGCGTGGT CAGCCTGGAG
CCGGTGTATT GCCTCGGGTT ATGCGCGACC GCGCCATCGG CGATGTTGGA CGGCCGGCTG
ATCGGCCGGC TCGACGCGAC GCGGCTCGAT GCCTTGCTGG CGGAGGCGCA GCGATGA
 
Protein sequence
MALAYEAWDS ERAAEIIAEL KSHEGATLVI LHALQEAFGY VPQDAIPMIA LALNLSRAEV 
HGVFTFYHDF RKVPAGRHVL KLCLAEACQS AGGDALAARA ETTLGMAVGE TRGDGVVSLE
PVYCLGLCAT APSAMLDGRL IGRLDATRLD ALLAEAQR