| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4603 |
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| Symbol | |
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| ID | 3972094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5137551 |
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| End bp | 5139902 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927714 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_534444 |
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| Protein GI | 90426074 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAG GCAACTCCGA ATTCGACGTC GCGGCTGTGG TCGATGCCCT TGACGTCGGC
GTTATCGTGC TGGACGAGCG CAGCGGCATC GTCGGTTGGA ACGATTGGAT CGCCCGGGTC
AGCAAGCTGC CGCGGTCCGA TGCGCTCGGA AGCAACCTGA TCGCGCTGTT TCCCAATCTC
GGCGGCACCC GGCTGCCCTC GGTGATCGCG GATTGCCTGC AGACCGGTAG CTCCAGCATT
CTCACCCATT CGCTCAACAA GTTGCTGCCG TTGCAGAACG AGAGCGGCGA AGAACTGCTG
CACAACATCG TGGTGCGACC GGTGTGGTCG AACGGCGCGC CGCGTTGCAT GTTGCAGATC
AACGATGTCA GCGTTCCGGT GGCCCGCGAG CGGGTGCTGC GCGAGCGGCA GAACGCGCGC
TACCACGCCA TCGTCGATTC CGCGCCGGAT GCGATCATCA CCATCGGGCT CGACCGCACC
ATCCAATGGG CCAACGGCGC GGCCGAACAA GTGTTCGGCT ACGAACTCTC CGAGCTGTTG
GACCACAAGC TCGATATGCT GCTGGAGCAC GATGATGATG GGCTGGTGCA GGCCTTCGTC
GACCTGCAGC ATTCGAACTC CTGCACGCTG CAGGTCAACG GCCGCCGCAA GTACGGCGAG
TTGTGCCAGT TCGAGGTGTC GCTCGGTCGC TGGAAGGCCG ACGAGCGGGT TTTCATCACC
ACGATCTGGC GCGACGTCAC CGAACGCACC ACCGCGGAAG CCGCCTTGCG CGACAGCGAA
GGCCGCCACC GCGCGCTGCT GGAGGCGTTG CCGCAGCTGG TGTGGACCTG CGACCAGCAC
GGCGAATGCG ATTACTTCAA TCCGCAATGG CAAGCCTACA CCGGCGCGCC TTTCGGCGAG
CATCTGGGCT CCGGCTGGCT CAAGGCCATC CACAAGGACG ACAGCGCCGC GTTCACCGAA
TCCTGGGCCG CGGCGCTGGC CGATGGCGGG GTATTCGACG TCGACGCCAG GCTTTGCCGC
AAGGACGGCA GCCACCGCTG GTTCAAGCTG CGCTCGATCC CGGTGCTGAC GCCGGACGGC
AGCATCAGCC GTTGGTTCGG CACCGCGACC GACATCACCG ACCACGTCGA GGCTCGCGAG
TCGCTCCGCC GCAGCAACGA AGAGCTCGAG GCGCTGGTGC AGGAACGCAC CCGCGAGCGC
GAATTGGCGC TGAACCAGCT GCACGAAGCG CAGAAGATGG AGACCATCGG CCAGCTCACC
GGCGGCGTCG CGCACGATTT CAACAATCTG CTGGCGGTGA TCCTCGGTAG CCTGTCGCTG
CTGAAGAAAT GGCTGCCGGA CGATCCGCGC ACCTCGCGGC TGCTCGACGG CGCGCTGCAG
GGCGCCGAAC GCGGCGCCAC GCTGACCAAG CGGCTATTGG CGTTCGCGCG GCGCCAGGAG
CTGAAGCTCG AAGCGGTGGA AATCCAGAAG CTGATCCCCG ACATGATGGA CTTCCTGCGC
CAATCGCTGG GACCGAACAT CAACATCAGC ATCGACATCC CCCCCGACGT CGAGCCGGTC
AAGATCGACG CCAACCAGCT CGAACTGGCG TTGATGAATC TGGCGGTGAA CGCCCGCGAC
GCGATGCCGT CCGGCGGCGC GCTGGTGATC ACCTGCCGCA ACGACGGCGC CGCCTCCAGC
GAACGGCCGA AGGGACTGCC GGACGGCGAC TACGTCTGCA TCAGCGTTGC CGATACCGGC
GAGGGGATGG ATCAGACCAC GCTGGCCAAG GCGATGGAGC CGTTCTTCAC CACCAAGGGA
TTGGGCAAGG GCACCGGGCT CGGGCTATCG ATGGTGCAAG GCCTGACCGC GCAGTCCGGC
GGCGCGATGA CGATGAGCAG CGAACTCGGC GACGGCACGG TGGTGAACCT GTGGCTGCCG
CGGGCGCGGC GCGAGGACAT GATTCATCCG GCGACCGCGC TGGCGCCGCT GGCCCGCGAT
GCCGCCAGCC AACAATTGCG CATCCTGCTG GTCGACGACG ACCCATTGGT GCGGATGAAC
ACCGCCTATC TGTTGATGGA TCTCGGCCAC AGCGTGATGG AGGCGCAGTC CGGCGCCCAG
GCGCTGCAGC TGCTCGGTTC CGACGCCCGG TTCGACGTGC TGCTCACCGA CTACGCGATG
CCGGGCATGA CCGGGCTCGA CCTGGCGACC AGGGTGAAGA TCGTCAAGCC GAAGCTCCCG
ATCGTGCTGG CCACCGGCTA TGCCGAATTG CCGCCGGACG CGCTGCTCGG TTTCCCGCGG
CTCGGCAAGC CCTACACCCA GGAGCAACTG GCGGAATCGC TGGAAGCCGC GATCCGCGAG
CGGGTGAACT AA
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| Protein sequence | MSEGNSEFDV AAVVDALDVG VIVLDERSGI VGWNDWIARV SKLPRSDALG SNLIALFPNL
GGTRLPSVIA DCLQTGSSSI LTHSLNKLLP LQNESGEELL HNIVVRPVWS NGAPRCMLQI
NDVSVPVARE RVLRERQNAR YHAIVDSAPD AIITIGLDRT IQWANGAAEQ VFGYELSELL
DHKLDMLLEH DDDGLVQAFV DLQHSNSCTL QVNGRRKYGE LCQFEVSLGR WKADERVFIT
TIWRDVTERT TAEAALRDSE GRHRALLEAL PQLVWTCDQH GECDYFNPQW QAYTGAPFGE
HLGSGWLKAI HKDDSAAFTE SWAAALADGG VFDVDARLCR KDGSHRWFKL RSIPVLTPDG
SISRWFGTAT DITDHVEARE SLRRSNEELE ALVQERTRER ELALNQLHEA QKMETIGQLT
GGVAHDFNNL LAVILGSLSL LKKWLPDDPR TSRLLDGALQ GAERGATLTK RLLAFARRQE
LKLEAVEIQK LIPDMMDFLR QSLGPNINIS IDIPPDVEPV KIDANQLELA LMNLAVNARD
AMPSGGALVI TCRNDGAASS ERPKGLPDGD YVCISVADTG EGMDQTTLAK AMEPFFTTKG
LGKGTGLGLS MVQGLTAQSG GAMTMSSELG DGTVVNLWLP RARREDMIHP ATALAPLARD
AASQQLRILL VDDDPLVRMN TAYLLMDLGH SVMEAQSGAQ ALQLLGSDAR FDVLLTDYAM
PGMTGLDLAT RVKIVKPKLP IVLATGYAEL PPDALLGFPR LGKPYTQEQL AESLEAAIRE
RVN
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