| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4584 |
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| Symbol | |
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| ID | 3971883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5117414 |
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| End bp | 5118376 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927695 |
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| Product | malate dehydrogenase, NAD-dependent |
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| Protein accession | YP_534425 |
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| Protein GI | 90426055 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGGA AGAAGATCGT CCTGGCCGGT GCCGGCCAAA TCGGCGGAAC GCTCGCCCAC
CTGGCGATGC TGCACCGGCT CGGCGACGTC ACGCTGCTCG ACGTCAACGC CAATCCGCCG
AAGGGCAAGG CGCTGGATCT GTCGCATGCC GCCGCGGTGG AGGGATGCGA CGCGGTGCTG
ACCGGCACCG CCGATCAGGC CGATATCGCC GGCGCCGACG TCGTGATCGT CACCGCCGGC
GTGCCGCGCC GGCCCGGCGT CGACCGCGAT GCGCTGCTGG CGATCAACCT GCCGGTGATG
GAATCGATCG GCACCGCGAT CGGCCGCTAT TGTCCCGACG CGTTCGTGAT CTGCATCACC
AACCCGCTGG ATGCGATGGT CTGGGCGCTG CGGCGGTTCT CCGGCCTGCC GCCCGCGCGC
GTCGTCGGGA TGGGCGGCGT GCTCGACAGC GCGCGGCTGC GCAGCTTTCT GGCCGAAGCG
CTCGGCGTCT CGGTGACCGA GGTGCAGGCG ATGACGCTCG GCGGCCACGG CGACGACATG
GTGCCGCTGG TGCGCCAGGC CACCGTCGGC GGGGTGCCGT TGCCGGCGTT GGTGAAGATG
GGCTGGATCA CCCAGCAAGC CATCGACGAC ATCGTGCAGC GGACCCGCAC CGGCGGCGCC
GAGGTGGTCA ACCTGCTGTG GACCAGTTCG GCCTACTACG CGCCGGCGAG CGCCGCCATC
GCCATGGCGA CGAGCTATCT CGGCGATCAG AAGCGGGTGT TCGCGGCCTC GGCGGCGCTG
AGCGGCCAAT ACGGCGTCGA CGGTCTCCAT GTCGGCGTCC CGGTGATGAT CGGCGCCGGC
GGCATCGAAA AAATCATCGA GCTGGAATTC GACGACGAGG AACAGCGTCA GTTCACGCGG
TCGGTCGCCG CCGTCGCCGC CCTGGTCGAG GACTGCAAGC GGCTGCATCG CGGGCTGGCG
TGA
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| Protein sequence | MSRKKIVLAG AGQIGGTLAH LAMLHRLGDV TLLDVNANPP KGKALDLSHA AAVEGCDAVL
TGTADQADIA GADVVIVTAG VPRRPGVDRD ALLAINLPVM ESIGTAIGRY CPDAFVICIT
NPLDAMVWAL RRFSGLPPAR VVGMGGVLDS ARLRSFLAEA LGVSVTEVQA MTLGGHGDDM
VPLVRQATVG GVPLPALVKM GWITQQAIDD IVQRTRTGGA EVVNLLWTSS AYYAPASAAI
AMATSYLGDQ KRVFAASAAL SGQYGVDGLH VGVPVMIGAG GIEKIIELEF DDEEQRQFTR
SVAAVAALVE DCKRLHRGLA
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