| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4548 |
|---|
| Symbol | |
|---|
| ID | 3971828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5078149 |
|---|
| End bp | 5078748 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637927659 |
|---|
| Product | potassium-transporting ATPase subunit C |
|---|
| Protein accession | YP_534389 |
|---|
| Protein GI | 90426019 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2156] K+-transporting ATPase, c chain |
|---|
| TIGRFAM ID | [TIGR00681] K+-transporting ATPase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.459209 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAG AAATCCGGCC CGCCATCGTG CTGTTGCTGG CGCTGACGCT GCTCACCGGC
CTGGCTTACC CCTTGGCGAT GACCGCGCTC GCCGGCGTGA TCTTCCCGAA GCAGGCGCAA
GGCAGTCTGA TCGAACAGGA CGGCCAGGTG ATCGGCTCGG CGCTGATCGG CCAGCCGTTC
ACCGAAGACA AGTATTTCCA TGGCCGCCCC TCGGCGACCA CGGCCGCCGA TCCGCAGGAT
TCCAGCAAGA CGGTGCCGGC GCCGTATAAT GCGGCGAACT CCGCCGGCTC CAATCTCGGC
CCGACCAACA AGGCGCTGAT CGACCGGGTC AAGGACGATG TCGACAAGCT GAAGGCGGAG
AATCCCTCCG CCGCGGTGCC GGTCGATCTG GTCACCACCT CGGCGAGCGG GCTTGACCCC
GACATCTCGC CGGAGGCCGC GCTGTTCCAG GTGCCGCGCG TCGCCAAAGC GCGGGGACTG
TCAGAGGAGC GGCTGCGCCA GCTGGTGAGC GATCACAGCA AAGCCCGGCT GGCCGGGCTG
CTCGGCGAGC CGCGGGTCAA CGTGCTGGCG CTCAATCTGG CGCTCGATGC GGCGAAGTAG
|
|---|
| Protein sequence | MLKEIRPAIV LLLALTLLTG LAYPLAMTAL AGVIFPKQAQ GSLIEQDGQV IGSALIGQPF
TEDKYFHGRP SATTAADPQD SSKTVPAPYN AANSAGSNLG PTNKALIDRV KDDVDKLKAE
NPSAAVPVDL VTTSASGLDP DISPEAALFQ VPRVAKARGL SEERLRQLVS DHSKARLAGL
LGEPRVNVLA LNLALDAAK
|
|---|
| |