Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4529 |
Symbol | |
ID | 3972078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5056231 |
End bp | 5058591 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927640 |
Product | carbon-monoxide dehydrogenase |
Protein accession | YP_534370 |
Protein GI | 90426000 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.565875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTTG AAGGCATTGG CGCGAGCGTG GTGCGCAAGG AAGACCGCCG TTTCATCACC GGGCGCGGCC GCTATGTCGA CGACATCAAG GTGATGGGCA TGACCCACGC CTATTTCGTC CGCAGCCCGC ACGCCCACGC CAAGGTGATC AGCATCGACG TCGAAGCCGC CAAGGCGATG CCCGGCGTGG TCGACGTGTT GACCGGCCAG CAGATCGTCG ACGACAAGGT CGGCAATCTG ATCTGCGGCT GGGCGGTGCA TTCCAAGGAC GGCTCGGCGA TGAAGATGGG CGCCTGGCCG GCGATGGCGC CGGAGACCGT GCGCTTCGTC GGCCAAGCGG TCGCGGTGGT GATCGCCGAG AGCCGGAACC TGGCGCGCGA CGCCGCCGAA GCCGTGGTGG TGCATTACGA AGAACTGCCG AGCGCCCACC ACATCGCGAT GGCGATCGCG CCCGGCGCGC CGCAGCTGCA TCCCGAGGCG CCCGGCAACA TCGTGTACGA CTGGTCGATC GGCGAGGAGA AGGCGGTCGA CGAGGCGTTT GCCAAGGCCG CCAATGTGGT GACGTTCGAG CTGGTCAATA ACCGCCTGGT GCCGAACGCG ATGGAGCCGC GCGCCGCACT CGCCGAATAC AACGAGGCCG AAGAACACTT CACGCTGCAC ACCACCTCGC AGAACCCGCA TGTCGCGCGC CTAGTGCTGT CGGCGTTCTA CAACATCGCG CCGGAACACA AGCTGCGGGT AGTGGCGCCG GACGTCGGCG GCGGCTTCGG TTCCAAGATC TTCATCTATC CGGAAGAGAT GGTGGCTTTG TGGGCGTCGA AGAAAGTCCG CCGCCCGGTG AAGTGGACCG GCGACCGCAA CGAAGCGTTC CTGACCGACG CCCATGGCCG CGATCATATC TCCAAAGCCG AGATGGCGTT CGACGCCGAC AACAAGATCC TCGGGCTCAG GGTGAAGACC CACGCCAATT TCGGCGCCTA TATGTCGCTG TTCTCCTCCT CGGTGCCGAC CTATCTGTAC GCCACGCTGT TGTCCGGCCA GTACAACATC CCGGCGATCT ATGCCGAGGT GATCGGCGTC TATACCAACA CCACGCCGGT CGACGCCTAT CGCGGCGCCG GGCGGCCGGA GGCCTGCTAC CTGTTGGAGC GGCTGATGGA GACCGCGGCG CGGCAGCTCA AGGTCGATCC GGCGGAATTG CGCCGCAAGA ACTTCATCAC CAGCTTCCCG CACCAGACCC CGGTGATCAT GGCCTATGAC ATCGGCGATT TCGGCGCCTC GCTCGACGCC GCCTTGAAGG CGATCGATTA TGCCGGCTTC CCGGCGCGCC GCGAGAAGGC AAAGAGCGAA GGCAAGCTGC GCGGGCTCGG CTTCTCCTGC TACATCGAGG CCTGCGGCAT CGCGCCGTCA AAGGCGGTGG GCTCGCTCGG CTCCGGCGTC GGTTTGTGGG AATCCGCCGA GGTGCGGGTC AATCCGGTCG GCACCATCGA GATCCTCACC GGCTCGCACA GCCACGGCCA GGGCCACGAG ACCACGTTCG CGCAACTGGT CGCCGATCGC CTTGGCATTC CGATCAGCCA GGTCTCGATC GTCCACGGCG ACACCGACAA GGTGCAGTTC GGCATGGGCA CCTACGGCTC GCGCTCGGCC GCCGTCGGCA TGTCGGCAAT CTTCAAGGCG ATGGAGAAGG TCGAGAAGAA GGCCAAGAAG ATCGCCGCGC ATCAGCTGGA AGCCTCGGAA GACGACATCG TGATCGAGAA CGGCGAGTTT AAGGTCACCG GCACCGACAA GTCGATCGCG CTGCCGATGG TGGCGCTGGC CGCCTACACC GCGCACAACC TGCCCGACGG CATGGAGCCG GGCCTCAAGG AAGGCGCGTT CTACGACCCG ACCAACTTCA CCTTCCCGGC CGGCAGCTAC ATCTGTGAAA TCGAAGTCGA CAAAGGCACC GGCAAGAGCA CTATCATCAA GTTCGTCGCG GTCGACGATT TCGGCCGGCT AATCAACCCG ATGATCGTCG ATGGCCAAGT CCATGGCGGG CTGGCGCAGG GCATCGGCCA GGCGATTCTC GAGCAGGCGA TCTATGACGA CACCGGGCAG TTGATCACCG CGTCGTTCAT GGACTACGCG ATGCCGCGCG CCGACGACGT GCCGAGCTTC GACATCTCGC ACACCACGAC GCTGTGCCCG GGCAATCCGC TCGGCGTCAA GGGCTGCGGC GAGGCCGGCG CGATCGGCGC CTCGGCGGCG GTGATCAACG CCATCACCGA CGCGATCGGC AACAACAAAC TCGACATGCC GGCGACCCCG GACCGGGTCT GGCACGCGAT GCAGGCATCG CTGCAGCAGG CGGCGGAGTA G
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Protein sequence | MGVEGIGASV VRKEDRRFIT GRGRYVDDIK VMGMTHAYFV RSPHAHAKVI SIDVEAAKAM PGVVDVLTGQ QIVDDKVGNL ICGWAVHSKD GSAMKMGAWP AMAPETVRFV GQAVAVVIAE SRNLARDAAE AVVVHYEELP SAHHIAMAIA PGAPQLHPEA PGNIVYDWSI GEEKAVDEAF AKAANVVTFE LVNNRLVPNA MEPRAALAEY NEAEEHFTLH TTSQNPHVAR LVLSAFYNIA PEHKLRVVAP DVGGGFGSKI FIYPEEMVAL WASKKVRRPV KWTGDRNEAF LTDAHGRDHI SKAEMAFDAD NKILGLRVKT HANFGAYMSL FSSSVPTYLY ATLLSGQYNI PAIYAEVIGV YTNTTPVDAY RGAGRPEACY LLERLMETAA RQLKVDPAEL RRKNFITSFP HQTPVIMAYD IGDFGASLDA ALKAIDYAGF PARREKAKSE GKLRGLGFSC YIEACGIAPS KAVGSLGSGV GLWESAEVRV NPVGTIEILT GSHSHGQGHE TTFAQLVADR LGIPISQVSI VHGDTDKVQF GMGTYGSRSA AVGMSAIFKA MEKVEKKAKK IAAHQLEASE DDIVIENGEF KVTGTDKSIA LPMVALAAYT AHNLPDGMEP GLKEGAFYDP TNFTFPAGSY ICEIEVDKGT GKSTIIKFVA VDDFGRLINP MIVDGQVHGG LAQGIGQAIL EQAIYDDTGQ LITASFMDYA MPRADDVPSF DISHTTTLCP GNPLGVKGCG EAGAIGASAA VINAITDAIG NNKLDMPATP DRVWHAMQAS LQQAAE
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