| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4509 |
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| Symbol | |
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| ID | 3972287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5024152 |
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| End bp | 5027220 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637927620 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_534351 |
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| Protein GI | 90425981 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0775662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATCG TTCACAAAGA CAAGACCATC CGCGTCCCGC TGGCATGGAT CATCGGCGCG
ATTTTCGCGT TGACGAGCGG CCTGATCTAT TTCTACGCCG CAAGCTCGAT CGAACTCAAT
CACCAGAACT TCAAGCTGGA ATCCGATGGC ATCGCACGCC TCGCTTCCGC GGAGGGCGAT
GTGGCGCTCG TCCGCATCAA GGACCTCATC GGCCTGGTGG CGAGCGGCGG GGAGGCGCTG
ATCGATGGCA AATTGAGGAG GGCCGCCAAG AAATCGGCGA ACATAAGGGA AATTGGCTAC
GTCCGCCTCG GCGGCGATTT CAGCCAGAAA TATTTCCTGA CGGATCGGAC CGCGCTTTCG
ATCGACAGAC AAGAGATGGC CTCGCTCAAC CTCGAGCTCA AGCGCAATTT AGCGCTGACC
CGCGGCGTCG TGACGTCCGC TTATCCGCGC ACATTCGCAG CGATATCAAA GGATCTCGTC
GTCTTCGTTC AGGGCGTTCC CGACGATACT GGGCCGGACC AGGACTTCAT CGCCTACGTG
ATTCTGGATT TGAAAACGGC CGTCTCACAG GCCGCCTCGA ACTTTGCAAC CAGCACCCTC
GTCACCGCAA TTCGGGTCTA TATCGACGGC AAGGTATCGG AGCTGTCGGT CGATGCCGTC
GTACAAAAGG CGGGACTGAT CGTCGAGCCT CATACGTCGA GCCGAACGGT GACGCTCAGC
AGCGATGTCG AGCTCGAAAT CGAATTCGCC GAACAATTTC CGGCGACGCG AAGCCTCATC
ATCTTCGCGT TGGGCTTGAT CGGGATCTTC GTGATTTCCT GCACTCTGTT TACGATGTTT
GCGCGGTCCG CGCGAGCGCA GAACAGGATT CTGAAACACG CCGTCAGGCG TGCCGAGGCC
GCCAATGAGG CGAAGAGCGA ATTTCTCGCC AACATGAGCC ATGAGATCCG GACACCCTTG
AACGGCGTTC TCGGAATGGC CGACGTGCTG ATGCGGACCG ATCTGACGCC GGTTCAGCGC
AACTACGCCC AGTTGATCGT GACATCCGGG TCGTTGCTGA TGACGATCCT GAACGACGTC
TTGGACATGG CAAAGCTCGA CAGCGGGCAA TTGGCGATCA AGCCCTGCAA GGTGGAATTG
CAGTTGCAGC TCAAGGAGGC GGCCAGCTTC TATTTCGCCC AGGCACGTGA GAAAGACCTG
GAGCTGGTTC TGGATGTAGC GCCGGATGTG CCGCGCCATG TGCAGCTCGA TCCGATGCGG
TTAAGGCAGA TCCTGGGCAA CCTGATCGGC AACGCCCTCA AATTCACGTC GAAGGGTGGC
GTCGCCGTCA TCGTGTCGTA CCAACACCAG GACGAGAAGT CGGGACGGCT TCACATCTCG
GTCGTGGACA CCGGCATCGG ACTGACCGAG GAACAGCAGG GAAAGTTGTT CGGTCGATTC
GTTCAGGCGG AGGACGACGG ACAGAGGCAT CGCGAAGGGA CCGGCCTCGG GCTGGCGATT
TGCAAGAAGC TCTGCAACGC GATGGGGGGC GAGATCGGGG TCACGAGTGA GAAGGGCGTC
GGCTCGACAT TCTCGTTCTG GATTCCGGTC ATCGAGGAGC GAGCCGACAG CGAGGACGAT
GCGCGGGGCC AGTGCATCGG CGTGGTGACG GGATCGGAGG CGCAGTTCAA GGCCATCGTC
CATGCGCTTT CGGATGCTGG AGTCCATTGC CGGAAATTCG AATACGGTCC GGATTGCTTG
CCGCGCATCC TGGCCGCGAT GAAGGCTGCG CCGATGCGCG CGCTGATCTT CGACGAGGAC
CGGAATATTC AGCGCGCAAG CGACCAGTGG CAGGCCCTGC AAGCGGAGAT CGGTCCGGGC
CTCCCGGCGT TGATTCTGGG CGAGTCGCAA TTCAGTCCGC ATTACGAGAA GTTCAGTGGC
TTCCTGGTGA AGCCGTTCAT CGCGGTGGAT CTGATTGACG AACTCCGGTC GATCAGTGCG
GAGGCGGCGG CACCGCCGCT GCCGTCGGGC GGCGTCTTGC GCGGGGCGTC CGCCGAGGCG
ATGGAGCTGC CGAAATTTTC CGGCTCTTCC GTTCTTCTGG TCGATGACAA CCAGATCAAT
CTGATCATCC TCGAAGAGAT CATGAAAGAG TTCGGCTTCG CGGTCGAGGC GACGACGGAA
GGGGCAAGCT CGATCCGGAT GGCTGAGGCG GGGTCGTTCG ATCTCATGCT GATCGATTGC
CAAATGCCGG TCATGAATGG GTTCGTTGTC ACCGGCAAAA TGCGCGAGCT GATGGCGGCG
GGCGAGATCA AGAGTTGCCC GATCGTGGCG GTGACGGCGA ACGCGCTCAA AGGCGACCGT
GAGGCCTGCA TCGAGGCCGG CATGGATGAT GTCGTGTTCA AGCCGATCTC GATCCGAATT
ATCGCCGATG CGCTGGATCA ACTCGTCAAG TCCGGGCTGC TCAAGGCGCC GTCGGCTCTC
GGTTCGGAGC GGGCGACGGC GGCGAGCCGC GCGACCGCCG CGGTGCCGCG ACCTGCGGTG
CTCGATCTGG CGCAACACGA CGCGCCGGCG GCTCCGGCGC CGGTGGTTGC GGCGCCGCTG
GTTCCGCCGC CGCCCGTCGT CGCGGCGCAG CCCGTTGCTC CCGCGCCGAA CGTCCCTGCT
GCGGCAACGG CCAAGCCGAA TCCGCCGGCT CCCGAAACCC CGGCAGGCAA GGTGCCGCTG
ATGGATCTGG CCGTGTTGAA GCAGACCCGC GACCTCGTTC GAAACTTGGA TACCCTGCTA
TCGCTCTACC GCGCCGACAC CCGAAACTAT CTGAACGTGC TGCGCGAGCA GATCGACGAG
GATGAGCTCG ACGAGGCCGT GCTGCCAGCC CACACCATCA AGAGCTCCAG CAAGATACTG
GGTGCCTCCG GCATGGCGGC GCTCGCTGGC TTGATGGAGA CGCGGCTCAG AACCGGTGAA
GGCTGTTCTC CCGCGGAATT GCGAAAGCTG CTGCAGAGGA TGGAGGACAT TTTCGCGCAC
ACGCTCCGAC AGCTGGATGC GCTCGAAGCT CAGGGGCTGC TCAAGCAGCC GGTCGCGGCG
GCTTCTTGA
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| Protein sequence | MLIVHKDKTI RVPLAWIIGA IFALTSGLIY FYAASSIELN HQNFKLESDG IARLASAEGD
VALVRIKDLI GLVASGGEAL IDGKLRRAAK KSANIREIGY VRLGGDFSQK YFLTDRTALS
IDRQEMASLN LELKRNLALT RGVVTSAYPR TFAAISKDLV VFVQGVPDDT GPDQDFIAYV
ILDLKTAVSQ AASNFATSTL VTAIRVYIDG KVSELSVDAV VQKAGLIVEP HTSSRTVTLS
SDVELEIEFA EQFPATRSLI IFALGLIGIF VISCTLFTMF ARSARAQNRI LKHAVRRAEA
ANEAKSEFLA NMSHEIRTPL NGVLGMADVL MRTDLTPVQR NYAQLIVTSG SLLMTILNDV
LDMAKLDSGQ LAIKPCKVEL QLQLKEAASF YFAQAREKDL ELVLDVAPDV PRHVQLDPMR
LRQILGNLIG NALKFTSKGG VAVIVSYQHQ DEKSGRLHIS VVDTGIGLTE EQQGKLFGRF
VQAEDDGQRH REGTGLGLAI CKKLCNAMGG EIGVTSEKGV GSTFSFWIPV IEERADSEDD
ARGQCIGVVT GSEAQFKAIV HALSDAGVHC RKFEYGPDCL PRILAAMKAA PMRALIFDED
RNIQRASDQW QALQAEIGPG LPALILGESQ FSPHYEKFSG FLVKPFIAVD LIDELRSISA
EAAAPPLPSG GVLRGASAEA MELPKFSGSS VLLVDDNQIN LIILEEIMKE FGFAVEATTE
GASSIRMAEA GSFDLMLIDC QMPVMNGFVV TGKMRELMAA GEIKSCPIVA VTANALKGDR
EACIEAGMDD VVFKPISIRI IADALDQLVK SGLLKAPSAL GSERATAASR ATAAVPRPAV
LDLAQHDAPA APAPVVAAPL VPPPPVVAAQ PVAPAPNVPA AATAKPNPPA PETPAGKVPL
MDLAVLKQTR DLVRNLDTLL SLYRADTRNY LNVLREQIDE DELDEAVLPA HTIKSSSKIL
GASGMAALAG LMETRLRTGE GCSPAELRKL LQRMEDIFAH TLRQLDALEA QGLLKQPVAA
AS
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